| All COGs for vibriocholerae_n16961_o1 : J |
| Genes (#) | COG | COG description |
| 2 | COG0009 | Putative translation factor (SUA5) |
| 3 | COG0042 | tRNA-dihydrouridine synthase |
| 2 | COG0050 | GTPases - translation elongation factors |
| 2 | COG0162 | Tyrosyl-tRNA synthetase |
| 2 | COG0231 | Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
| 2 | COG0242 | N-formylmethionyl-tRNA deformylase |
| 2 | COG0251 | Putative translation initiation inhibitor, yjgF family |
| 2 | COG0254 | Ribosomal protein L31 |
| 2 | COG0480 | Translation elongation factors (GTPases) |
| 9 | COG0513 | Superfamily II DNA and RNA helicases |
| 6 | COG0564 | Pseudouridylate synthases, 23S RNA-specific |
| 2 | COG0566 | rRNA methylases |
| 1 | COG0590 | Cytosine/adenosine deaminases |
| 2 | COG0621 | 2-methylthioadenine synthetase |
| 4 | COG1187 | 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
| 2 | COG1530 | Ribonucleases G and E |
| 2 | COG1544 | Ribosome-associated protein Y (PSrp-1) |
| 6 | COG1670 | Acetyltransferases, including N-acetylases of ribosomal proteins |
| 2 | COG2026 | Cytotoxic translational repressor of toxin-antitoxin stability system |
| 2 | COG2890 | Methylase of polypeptide chain release factors |
| Included Genes in vibriocholerae_n16961_o1 : J |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AE003852_50104 | AAF93232.1 | 31312 | COG0009 | Putative translation factor (SUA5) | Sua5/YciO/YrdC family protein |
| AE003852_1250109 | AAF94337.1 | 31312 | COG0009 | Putative translation factor (SUA5) | conserved hypothetical protein |
| AE003852_300209 | AAF93465.1 | 33654 | COG0042 | tRNA-dihydrouridine synthase | NifR3/Smm1 family protein |
| AE003852_394329 | AAF93552.1 | 33654 | COG0042 | tRNA-dihydrouridine synthase | NifR3/Smm1 family protein |
| AE003852_1175203 | AAF94264.1 | 33654 | COG0042 | tRNA-dihydrouridine synthase | conserved hypothetical protein |
| AE003852_335326 | AAF93494.1 | 32928 | COG0050 | GTPases - translation elongation factors | elongation factor Tu |
| AE003852_381760 | AAF93535.1 | 32928 | COG0050 | GTPases - translation elongation factors | elongation factor TU |
| AE003852_494454 | AAF93638.1 | 5731 | COG0162 | Tyrosyl-tRNA synthetase | tyrosyl-tRNA synthetase |
| AE003852_672030 | AAF93797.1 | 5731 | COG0162 | Tyrosyl-tRNA synthetase | tyrosyl-tRNA synthetase |
| AE003852_2830191 | AAF95801.1 | 15111 | COG0231 | Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) | elongation factor P |
| AE003852_1284104 | AAF94368.1 | 15111 | COG0231 | Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) | elongation factor P family protein |
| AE003852_44299 | AAF93224.1 | 31380 | COG0242 | N-formylmethionyl-tRNA deformylase | polypeptide deformylase |
| AE003853_167987 | AAF96063.1 | 31380 | COG0242 | N-formylmethionyl-tRNA deformylase | polypeptide deformylase |
| AE003852_2701112 | AAF95654.1 | 32246 | COG0251 | Putative translation initiation inhibitor, yjgF family | conserved hypothetical protein |
| AE003852_1667625 | AAF94710.1 | 32246 | COG0251 | Putative translation initiation inhibitor, yjgF family | conserved hypothetical protein |
| AE003852_2847810 | AAF95820.1 | 5386 | COG0254 | Ribosomal protein L31 | ribosomal protein L31 |
| AE003852_940625 | AAF94040.1 | 5386 | COG0254 | Ribosomal protein L31 | ribosomal protein, L31P family |
| AE003852_2495396 | AAF95485.1 | 1111 | COG0480 | Translation elongation factors (GTPases) | elongation factor G |
| AE003852_379541 | AAF93534.1 | 1111 | COG0480 | Translation elongation factors (GTPases) | elongation factor G |
| AE003852_1499666 | AAF94564.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-dependent RNA helicase RhlE |
| AE003852_705587 | AAF93826.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-dependent RNA helicase SrmB |
| AE003852_316344 | AAF93479.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-dependent RNA helicase RhlB |
| AE003852_2746119 | AAF95705.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-dependent RNA helicase DbpA |
| AE003853_67304 | AAF95975.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-dependent RNA helicase, DEAD box family |
| AE003853_220767 | AAF96116.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-dependent RNA helicase RhlE |
| AE003853_711450 | AAF96666.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-dependent RNA helicase, DEAD box family |
| AE003853_944006 | AAF96886.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-dependent RNA helicase, DEAD box family |
| AE003853_746491 | AAF96702.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-dependent RNA helicase DeaD |
| AE003852_2179885 | AAF95176.1 | 32414 | COG0564 | Pseudouridylate synthases, 23S RNA-specific | ribosomal large subunit pseudouridine synthase C |
| AE003852_1799619 | AAF94818.1 | 32414 | COG0564 | Pseudouridylate synthases, 23S RNA-specific | pseudouridine synthase Rlu family protein |
| AE003852_757851 | AAF93874.1 | 32414 | COG0564 | Pseudouridylate synthases, 23S RNA-specific | ribosomal large subunit pseudouridine synthase D |
| AE003853_112691 | AAF96018.1 | 32414 | COG0564 | Pseudouridylate synthases, 23S RNA-specific | ribosomal large subunit pseudouridine synthase A |
| AE003852_946691 | AAF94050.1 | 32414 | COG0564 | Pseudouridylate synthases, 23S RNA-specific | pseudouridine synthase Rlu family protein |
| AE003852_2692654 | AAF95647.1 | 32414 | COG0564 | Pseudouridylate synthases, 23S RNA-specific | ribosomal large subunit pseudouridine synthase A |
| AE003852_859267 | AAF93967.1 | 35599 | COG0566 | rRNA methylases | RNA methyltransferase, TrmH family |
| AE003852_2765252 | AAF95739.1 | 35599 | COG0566 | rRNA methylases | RNA methyltransferase, TrmH family |
| AE003852_929010 | AAF94026.1 | 27403 | COG0590 | Cytosine/adenosine deaminases | yfhC protein |
| AE003852_1026188 | AAF94124.1 | 35 | COG0621 | 2-methylthioadenine synthetase | conserved hypothetical protein |
| AE003852_2788972 | AAF95761.1 | 35 | COG0621 | 2-methylthioadenine synthetase | conserved hypothetical protein |
| AE003852_1250862 | AAF94338.1 | 10947 | COG1187 | 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases | pseudouridine synthase family 1 protein |
| AE003852_1760983 | AAF94786.1 | 10947 | COG1187 | 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases | ribosomal small subunit pseudouridine synthase A |
| AE003852_1208619 | AAF94299.1 | 10947 | COG1187 | 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases | pseudouridine synthase family 1 protein |
| AE003852_2376860 | AAF95367.1 | 10947 | COG1187 | 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases | pseudouridine synthase family 1 protein |
| AE003852_2181444 | AAF95178.1 | 31656 | COG1530 | Ribonucleases G and E | ribonuclease E |
| AE003852_445206 | AAF93592.1 | 31656 | COG1530 | Ribonucleases G and E | cytoplasmic axial filament protein |
| AE003852_756243 | AAF93871.1 | 13534 | COG1544 | Ribosome-associated protein Y (PSrp-1) | sigma-54 modulation protein, putative |
| AE003852_2713398 | AAF95671.1 | 13534 | COG1544 | Ribosome-associated protein Y (PSrp-1) | sigma-54 modulation protein, putative |
| AE003852_1391516 | AAF94467.1 | 35587 | COG1670 | Acetyltransferases, including N-acetylases of ribosomal proteins | ribosomal-protein-alanine acetyltransferase |
| AE003853_383932 | AAF96323.1 | 35587 | COG1670 | Acetyltransferases, including N-acetylases of ribosomal proteins | acetyltransferase, putative |
| AE003853_398032 | AAF96348.1 | 35587 | COG1670 | Acetyltransferases, including N-acetylases of ribosomal proteins | acetyltransferase, putative |
| AE003853_899206 | AAF96843.1 | 35587 | COG1670 | Acetyltransferases, including N-acetylases of ribosomal proteins | spermidine n1-acetyltransferase |
| AE003853_324552 | AAF96224.1 | 35587 | COG1670 | Acetyltransferases, including N-acetylases of ribosomal proteins | acetyltransferase, putative |
| AE003853_418092 | AAF96378.1 | 35587 | COG1670 | Acetyltransferases, including N-acetylases of ribosomal proteins | acetyltransferase, putative |
| AE003853_420238 | AAF96382.1 | 17552 | COG2026 | Cytotoxic translational repressor of toxin-antitoxin stability system | conserved hypothetical protein |
| AE003853_399296 | AAF96350.1 | 17552 | COG2026 | Cytotoxic translational repressor of toxin-antitoxin stability system | relE protein |
| AE003852_2322906 | AAF95323.1 | 9595 | COG2890 | Methylase of polypeptide chain release factors | hemK protein |
| AE003852_2273537 | AAF95263.1 | 9595 | COG2890 | Methylase of polypeptide chain release factors | adenine-specific methylase, putative |
| Excluded Genes in vibriocholerae_n16961_o1 : J |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| No results Found ... |
