| All COGs for listeriainnocua_clip11262 : E |
| Genes (#) | COG | COG description |
| 2 | COG0006 | Xaa-Pro aminopeptidase |
| 3 | COG0028 | Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
| 2 | COG0076 | Glutamate decarboxylase and related PLP-dependent proteins |
| 1 | COG0078 | Ornithine carbamoyltransferase |
| 2 | COG0079 | Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
| 1 | COG0106 | Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
| 1 | COG0107 | Imidazoleglycerol-phosphate synthase |
| 1 | COG0111 | Phosphoglycerate dehydrogenase and related dehydrogenases |
| 2 | COG0115 | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
| 1 | COG0118 | Glutamine amidotransferase |
| 3 | COG0169 | Shikimate 5-dehydrogenase |
| 3 | COG0346 | Lactoylglutathione lyase and related lyases |
| 4 | COG0436 | Aspartate/tyrosine/aromatic aminotransferase |
| 1 | COG0444 | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
| 2 | COG0462 | Phosphoribosylpyrophosphate synthetase |
| 9 | COG0477 | Permeases of the major facilitator superfamily |
| 1 | COG0498 | Threonine synthase |
| 2 | COG0512 | Anthranilate/para-aminobenzoate synthases component II |
| 1 | COG0520 | Selenocysteine lyase |
| 3 | COG0527 | Aspartokinases |
| 2 | COG0531 | Amino acid transporters |
| 2 | COG0601 | ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
| 2 | COG0626 | Cystathionine beta-lyases/cystathionine gamma-synthases |
| 4 | COG0765 | ABC-type amino acid transport system, permease component |
| 1 | COG0833 | Amino acid transporters |
| 3 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
| 3 | COG1063 | Threonine dehydrogenase and related Zn-dependent dehydrogenases |
| 3 | COG1104 | Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
| 1 | COG1113 | Gamma-aminobutyrate permease and related permeases |
| 2 | COG1125 | ABC-type proline/glycine betaine transport systems, ATPase components |
| 4 | COG1126 | ABC-type polar amino acid transport system, ATPase component |
| 1 | COG1171 | Threonine dehydratase |
| 2 | COG1173 | ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
| 2 | COG1174 | ABC-type proline/glycine betaine transport systems, permease component |
| 1 | COG1177 | ABC-type spermidine/putrescine transport system, permease component II |
| 1 | COG2873 | O-acetylhomoserine sulfhydrylase |
| 1 | COG3705 | ATP phosphoribosyltransferase involved in histidine biosynthesis |
| 2 | COG3842 | ABC-type spermidine/putrescine transport systems, ATPase components |
| 4 | COG4166 | ABC-type oligopeptide transport system, periplasmic component |
| 1 | COG4175 | ABC-type proline/glycine betaine transport system, ATPase component |
| 1 | COG4608 | ABC-type oligopeptide transport system, ATPase component |
| 1 | COG4992 | Ornithine/acetylornithine aminotransferase |
| Included Genes in listeriainnocua_clip11262 : E |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AL592022_1385628 | CAC96622.1 | 494 | COG0006 | Xaa-Pro aminopeptidase | |
| AL592022_1624564 | CAC96844.1 | 494 | COG0006 | Xaa-Pro aminopeptidase | |
| AL592022_2129664 | CAC97344.1 | 19738 | COG0028 | Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] | |
| AL592022_2105259 | CAC97321.1 | 19738 | COG0028 | Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] | |
| AL592022_750881 | CAC95962.1 | 19738 | COG0028 | Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] | |
| AL592022_2549470 | CAC97755.1 | 9001 | COG0076 | Glutamate decarboxylase and related PLP-dependent proteins | |
| AL592022_2482902 | CAC97690.1 | 9001 | COG0076 | Glutamate decarboxylase and related PLP-dependent proteins | |
| AL592022_1638302 | CAC96860.1 | 32264 | COG0078 | Ornithine carbamoyltransferase | |
| AL592022_2054970 | CAC97269.1 | 15660 | COG0079 | Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase | |
| AL592022_1148718 | CAC96364.1 | 15660 | COG0079 | Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase | |
| AL592022_601244 | CAC95805.1 | 726 | COG0106 | Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase | |
| AL592022_600499 | CAC95804.1 | 726 | COG0107 | Imidazoleglycerol-phosphate synthase | |
| AL592022_1799405 | CAC97023.1 | 21404 | COG0111 | Phosphoglycerate dehydrogenase and related dehydrogenases | |
| AL592022_1000693 | CAC96208.1 | 32473 | COG0115 | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase | |
| AL592022_1669769 | CAC96891.1 | 32473 | COG0115 | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase | D-Amino Acid Aminotransferase |
| AL592022_601945 | CAC95806.1 | 648 | COG0118 | Glutamine amidotransferase | |
| AL592022_2373452 | CAC97565.1 | 33885 | COG0169 | Shikimate 5-dehydrogenase | |
| AL592022_517251 | CAC95725.1 | 33885 | COG0169 | Shikimate 5-dehydrogenase | |
| AL592022_1525991 | CAC96756.1 | 33885 | COG0169 | Shikimate 5-dehydrogenase | |
| AL592022_775425 | CAC95985.1 | 1015 | COG0346 | Lactoylglutathione lyase and related lyases | |
| AL592022_304803 | CAC95525.1 | 1015 | COG0346 | Lactoylglutathione lyase and related lyases | |
| AL592022_774538 | CAC95984.1 | 1015 | COG0346 | Lactoylglutathione lyase and related lyases | |
| AL592022_2387853 | CAC97581.1 | 22905 | COG0436 | Aspartate/tyrosine/aromatic aminotransferase | |
| AL592022_2024755 | CAC97241.1 | 22905 | COG0436 | Aspartate/tyrosine/aromatic aminotransferase | |
| AL592022_327489 | CAC95547.1 | 22905 | COG0436 | Aspartate/tyrosine/aromatic aminotransferase | |
| AL592022_1028563 | CAC96236.1 | 22905 | COG0436 | Aspartate/tyrosine/aromatic aminotransferase | |
| AL592022_2327160 | CAC97525.1 | 35629 | COG0444 | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component | |
| AL592022_234565 | CAC95471.1 | 2174 | COG0462 | Phosphoribosylpyrophosphate synthetase | phosphoribosyl pyrophosphate synthetase |
| AL592022_530143 | CAC95741.1 | 2174 | COG0462 | Phosphoribosylpyrophosphate synthetase | |
| AL592022_2374354 | CAC97566.1 | 13026 | COG0477 | Permeases of the major facilitator superfamily | |
| AL592022_2375722 | CAC97567.1 | 13026 | COG0477 | Permeases of the major facilitator superfamily | |
| AL592022_2753936 | CAC97959.1 | 18467 | COG0477 | Permeases of the major facilitator superfamily | |
| AL592022_539786 | CAC95751.1 | 18467 | COG0477 | Permeases of the major facilitator superfamily | |
| AL592022_1667633 | CAC96889.1 | 18467 | COG0477 | Permeases of the major facilitator superfamily | |
| AL592022_2502660 | CAC97703.1 | 1962 | COG0477 | Permeases of the major facilitator superfamily | |
| AL592022_2897441 | CAC98110.1 | 1962 | COG0477 | Permeases of the major facilitator superfamily | |
| AL592022_1003456 | CAC96211.1 | 32899 | COG0477 | Permeases of the major facilitator superfamily | |
| AL592022_2999980 | CAC98202.1 | 32899 | COG0477 | Permeases of the major facilitator superfamily | |
| AL592022_2706512 | CAC97916.1 | 32599 | COG0498 | Threonine synthase | |
| AL592022_2905161 | CAC98118.1 | 648 | COG0512 | Anthranilate/para-aminobenzoate synthases component II | |
| AL592022_1682537 | CAC96904.1 | 648 | COG0512 | Anthranilate/para-aminobenzoate synthases component II | |
| AL592022_2530668 | CAC97735.1 | 17179 | COG0520 | Selenocysteine lyase | |
| AL592022_1212799 | CAC96429.1 | 11640 | COG0527 | Aspartokinases | |
| AL592022_2499965 | CAC97700.1 | 11640 | COG0527 | Aspartokinases | |
| AL592022_1476283 | CAC96706.1 | 11640 | COG0527 | Aspartokinases | |
| AL592022_2628342 | CAC97840.1 | 353 | COG0531 | Amino acid transporters | |
| AL592022_678404 | CAC95880.1 | 353 | COG0531 | Amino acid transporters | |
| AL592022_174262 | CAC95416.1 | 9810 | COG0601 | ABC-type dipeptide/oligopeptide/nickel transport systems, permease components | |
| AL592022_2329288 | CAC97527.1 | 9810 | COG0601 | ABC-type dipeptide/oligopeptide/nickel transport systems, permease components | |
| AL592022_1785371 | CAC97018.1 | 1430 | COG0626 | Cystathionine beta-lyases/cystathionine gamma-synthases | |
| AL592022_1786536 | CAC97019.1 | 1430 | COG0626 | Cystathionine beta-lyases/cystathionine gamma-synthases | |
| AL592022_2458761 | CAC97668.1 | 21232 | COG0765 | ABC-type amino acid transport system, permease component | |
| AL592022_2459482 | CAC97669.1 | 21232 | COG0765 | ABC-type amino acid transport system, permease component | |
| AL592022_1863596 | CAC97082.1 | 21232 | COG0765 | ABC-type amino acid transport system, permease component | |
| AL592022_874410 | CAC96072.1 | 21232 | COG0765 | ABC-type amino acid transport system, permease component | |
| AL592022_815720 | CAC96023.1 | 26 | COG0833 | Amino acid transporters | |
| AL592022_2385601 | CAC97579.1 | 21232 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | |
| AL592022_2460220 | CAC97670.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | |
| AL592022_1862121 | CAC97080.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | |
| AL592022_2828578 | CAC98039.1 | 33297 | COG1063 | Threonine dehydrogenase and related Zn-dependent dehydrogenases | |
| AL592022_2827545 | CAC98038.1 | 33297 | COG1063 | Threonine dehydrogenase and related Zn-dependent dehydrogenases | |
| AL592022_527362 | CAC95738.1 | 33297 | COG1063 | Threonine dehydrogenase and related Zn-dependent dehydrogenases | |
| AL592022_1644798 | CAC96866.1 | 17179 | COG1104 | Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes | |
| AL592022_1549528 | CAC96779.1 | 17179 | COG1104 | Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes | |
| AL592022_2152884 | CAC97360.1 | 17179 | COG1104 | Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes | |
| AL592022_802582 | CAC96012.1 | 26 | COG1113 | Gamma-aminobutyrate permease and related permeases | |
| AL592022_1467111 | CAC96698.1 | 35629 | COG1125 | ABC-type proline/glycine betaine transport systems, ATPase components | |
| AL592022_1459876 | CAC96691.1 | 35629 | COG1125 | ABC-type proline/glycine betaine transport systems, ATPase components | |
| AL592022_875845 | CAC96073.1 | 35629 | COG1126 | ABC-type polar amino acid transport system, ATPase component | |
| AL592022_2457985 | CAC97667.1 | 35629 | COG1126 | ABC-type polar amino acid transport system, ATPase component | |
| AL592022_1862938 | CAC97081.1 | 35629 | COG1126 | ABC-type polar amino acid transport system, ATPase component | |
| AL592022_2387054 | CAC97580.1 | 35629 | COG1126 | ABC-type polar amino acid transport system, ATPase component | |
| AL592022_2113292 | CAC97328.1 | 32599 | COG1171 | Threonine dehydratase | |
| AL592022_175223 | CAC95417.1 | 32450 | COG1173 | ABC-type dipeptide/oligopeptide/nickel transport systems, permease components | |
| AL592022_2328254 | CAC97526.1 | 32450 | COG1173 | ABC-type dipeptide/oligopeptide/nickel transport systems, permease components | |
| AL592022_1464837 | CAC96695.1 | 33975 | COG1174 | ABC-type proline/glycine betaine transport systems, permease component | |
| AL592022_1466451 | CAC96697.1 | 33975 | COG1174 | ABC-type proline/glycine betaine transport systems, permease component | |
| AL592022_824437 | CAC96031.1 | 18314 | COG1177 | ABC-type spermidine/putrescine transport system, permease component II | |
| AL592022_635428 | CAC95836.1 | 1430 | COG2873 | O-acetylhomoserine sulfhydrylase | |
| AL592022_605078 | CAC95810.1 | 4412 | COG3705 | ATP phosphoribosyltransferase involved in histidine biosynthesis | histidyl-tRNA synthetase |
| AL592022_822537 | CAC96029.1 | 35629 | COG3842 | ABC-type spermidine/putrescine transport systems, ATPase components | |
| AL592022_1051597 | CAC96262.1 | 35629 | COG3842 | ABC-type spermidine/putrescine transport systems, ATPase components | |
| AL592022_2732747 | CAC97940.1 | 32624 | COG4166 | ABC-type oligopeptide transport system, periplasmic component | |
| AL592022_179138 | CAC95423.1 | 32624 | COG4166 | ABC-type oligopeptide transport system, periplasmic component | |
| AL592022_190599 | CAC95433.1 | 32624 | COG4166 | ABC-type oligopeptide transport system, periplasmic component | |
| AL592022_2330495 | CAC97528.1 | 32624 | COG4166 | ABC-type oligopeptide transport system, periplasmic component | |
| AL592022_1035436 | CAC96244.1 | 35629 | COG4175 | ABC-type proline/glycine betaine transport system, ATPase component | |
| AL592022_2326195 | CAC97524.1 | 35629 | COG4608 | ABC-type oligopeptide transport system, ATPase component | |
| AL592022_1639254 | CAC96861.1 | 15723 | COG4992 | Ornithine/acetylornithine aminotransferase | |
| Excluded Genes in listeriainnocua_clip11262 : E |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AL592022_1816091 | CAC97041.1 | 33556 | COG0346 | Lactoylglutathione lyase and related lyases | |
| AL592022_1997097 | CAC97212.1 | 33556 | COG0346 | Lactoylglutathione lyase and related lyases | |
| AL592022_439680 | CAC95662.1 | 33556 | COG0346 | Lactoylglutathione lyase and related lyases | |
| AL592022_2290636 | CAC97499.1 | 33556 | COG0346 | Lactoylglutathione lyase and related lyases | |
| AL592022_2381460 | CAC97574.1 | 33556 | COG0346 | Lactoylglutathione lyase and related lyases | |
| AL592022_2110263 | CAC97325.1 | 2973 | COG0473 | Isocitrate/isopropylmalate dehydrogenase | |
| AL592022_1759826 | CAC96994.1 | 941 | COG2856 | Predicted Zn peptidase | |
| AL592022_1248769 | CAC96464.1 | 941 | COG2856 | Predicted Zn peptidase | |
