All COGs for vibriocholerae_n16961_o1 : C
Genes (#)COGCOG description
1COG0055F0F1-type ATP synthase, beta subunit
1COG0114Fumarase
2COG0243Anaerobic dehydrogenases, typically selenocysteine-containing
2COG0282Acetate kinase
2COG0372Citrate synthase
2COG0479Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit
2COG0508Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
3COG0526Thiol-disulfide isomerase and thioredoxins
2COG0604NADPH:quinone reductase and related Zn-dependent oxidoreductases
3COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
1COG0667Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
2COG0716Flavodoxins
5COG1012NAD-dependent aldehyde dehydrogenases
2COG1052Lactate dehydrogenase and related dehydrogenases
2COG1053Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
4COG1249Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
3COG1271Cytochrome bd-type quinol oxidase, subunit 1
3COG1294Cytochrome bd-type quinol oxidase, subunit 2
2COG1301Na+/H+-dicarboxylate symporters
2COG1347Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD
2COG1454Alcohol dehydrogenase, class IV
2COG1757Na+/H+ antiporter
2COG1883Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit
2COG1902NADH:flavin oxidoreductases, Old Yellow Enzyme family
1COG1979Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
2COG2209Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE
3COG3005Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit
2COG3038Cytochrome B561
1COG3288NAD/NADP transhydrogenase alpha subunit

Included Genes in vibriocholerae_n16961_o1 : C
gene_idprotein_idgene_familycogcog_descriptionproduct
AE003852_2950126AAF95903.1454COG0055F0F1-type ATP synthase, beta subunitATP synthase F1, beta subunit
AE003852_1684519AAF94727.1824COG0114Fumarasefumarate hydratase, class II
AE003852_1824695AAF94842.19235COG0243Anaerobic dehydrogenases, typically selenocysteine-containingtrimethylamine-N-oxide reductase
AE003852_2100348AAF95098.19235COG0243Anaerobic dehydrogenases, typically selenocysteine-containingbiotin sulfoxide reductase
AE003853_256240AAF96146.13393COG0282Acetate kinaseacetate kinase
AE003852_1167747AAF94257.13393COG0282Acetate kinaseacetate kinase
AE003852_2253161AAF95238.178COG0372Citrate synthasecitrate synthase
AE003852_1420812AAF94495.178COG0372Citrate synthasemethylcitrate synthase
AE003852_2828560AAF95798.112118COG0479Succinate dehydrogenase/fumarate reductase, Fe-S protein subunitfumarate reductase, iron-sulfur protein
AE003852_2249549AAF95234.112118COG0479Succinate dehydrogenase/fumarate reductase, Fe-S protein subunitsuccinate dehydrogenase, iron-sulfur protein
AE003852_2245407AAF95232.131857COG0508Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
AE003852_2582987AAF95556.131857COG0508Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymespyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase
AE003852_2207961AAF95197.132187COG0526Thiol-disulfide isomerase and thioredoxinsthiol:disulfide interchange protein DsbE
AE003853_696838AAF96650.133319COG0526Thiol-disulfide isomerase and thioredoxinsthioredoxin 2
AE003852_317772AAF93480.133319COG0526Thiol-disulfide isomerase and thioredoxinsthioredoxin
AE003852_22028AAF93204.133297COG0604NADPH:quinone reductase and related Zn-dependent oxidoreductaseszinc-binding alcohol dehydrogenase
AE003852_585639AAF93720.133297COG0604NADPH:quinone reductase and related Zn-dependent oxidoreductasesquinone oxidoreductase
AE003852_2655843AAF95617.17048COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesubiH protein
AE003852_2654602AAF95616.17048COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesvisC protein
AE003852_1027836AAF94125.17048COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesVisC-related protein
AE003852_714596AAF93832.133907COG0667Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)oxidoreductase Tas, aldo/keto reductase family
AE003852_2259674AAF95245.16751COG0716Flavodoxinsflavodoxin 1
AE003852_2594343AAF95563.16751COG0716Flavodoxinsflavodoxin 2
AE003852_875273AAF93982.121124COG1012NAD-dependent aldehyde dehydrogenasesaldehyde dehydrogenase
AE003852_1959245AAF94967.121124COG1012NAD-dependent aldehyde dehydrogenasesaldehyde dehydrogenase
AE003852_2783902AAF95757.121124COG1012NAD-dependent aldehyde dehydrogenasessuccinylglutamate 5-semialdehyde dehydrogenase
AE003852_1880232AAF94895.121124COG1012NAD-dependent aldehyde dehydrogenasessuccinate-semialdehyde dehydrogenase
AE003853_1016331AAF96961.121124COG1012NAD-dependent aldehyde dehydrogenasesaldehyde dehydrogenase
AE003852_2691637AAF95646.121404COG1052Lactate dehydrogenase and related dehydrogenases2-hydroxyacid dehydrogenase family protein
AE003853_208570AAF96105.121404COG1052Lactate dehydrogenase and related dehydrogenasesD-lactate dehydrogenase
AE003852_2250274AAF95235.18352COG1053Succinate dehydrogenase/fumarate reductase, flavoprotein subunitsuccinate dehydrogenase, flavoprotein subunit
AE003852_2826752AAF95797.18352COG1053Succinate dehydrogenase/fumarate reductase, flavoprotein subunitfumarate reductase, flavoprotein subunit
AE003852_141066AAF93328.134181COG1249Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymespyridine nucleotide-disulfide oxidoreductase, class I
AE003852_189457AAF93362.134181COG1249Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymesglutathione reductase
AE003852_2581292AAF95555.134181COG1249Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymespyruvate dehydrogenase, E3 component, lipoamide dehydrogenase
AE003852_2810121AAF95779.134181COG1249Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymespyridine nucleotide-disulfide oxidoreductase, class I
AE003853_823951AAF96770.13333COG1271Cytochrome bd-type quinol oxidase, subunit 1cytochrome d ubiquinol oxidase, subunit I
AE003852_1682263AAF94725.13333COG1271Cytochrome bd-type quinol oxidase, subunit 1quinol oxidase, subunit I
AE003852_1982851AAF94992.13333COG1271Cytochrome bd-type quinol oxidase, subunit 1cytochrome d ubiquinol oxidase, subunit I
AE003853_825556AAF96771.19096COG1294Cytochrome bd-type quinol oxidase, subunit 2cytochrome d ubiquinol oxidase, subunit II
AE003852_1681274AAF94724.19096COG1294Cytochrome bd-type quinol oxidase, subunit 2quinol oxidase, subunit II
AE003852_1981697AAF94991.19096COG1294Cytochrome bd-type quinol oxidase, subunit 2cytochrome d ubiquinol oxidase, subunit II
AE003852_1240676AAF94327.11645COG1301Na+/H+-dicarboxylate symportersproton/glutamate symporter
AE003853_97546AAF96002.11645COG1301Na+/H+-dicarboxylate symportersproton/glutamate symporter
AE003852_1081026AAF94173.120196COG1347Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrDRnfE-related protein
AE003852_2446787AAF95436.120196COG1347Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrDNADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
AE003852_1217797AAF94306.11517COG1454Alcohol dehydrogenase, class IViron-containing alcohol dehydrogenase
AE003852_256177AAF93426.11517COG1454Alcohol dehydrogenase, class IViron-containing alcohol dehydrogenase family protein RfbM
AE003853_230465AAF96125.114666COG1757Na+/H+ antiporterconserved hypothetical protein
AE003852_1199268AAF94290.114666COG1757Na+/H+ antiporterconserved hypothetical protein
AE003852_848056AAF93957.15582COG1883Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunitoxaloacetate decarboxylase, beta subunit
AE003852_584449AAF93719.15582COG1883Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunitoxaloacetate decarboxylase, beta subunit
AE003853_947097AAF96889.119069COG1902NADH:flavin oxidoreductases, Old Yellow Enzyme familyN-ethylmaleimide reductase
AE003853_952463AAF96894.119069COG1902NADH:flavin oxidoreductases, Old Yellow Enzyme familyNADH-dependent flavin oxidoreductase, Oye family
AE003853_642655AAF96601.11517COG1979Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase familyiron-containing alcohol dehydrogenase
AE003852_2446183AAF95435.120196COG2209Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrENADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
AE003852_1086327AAF94178.120196COG2209Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrERnfA-related protein
AE003852_1827181AAF94843.121187COG3005Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunitcytochrome c-type protein TorC
AE003852_2102818AAF95099.121187COG3005Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunitcytochrome c-type protein YecK
AE003853_615585AAF96580.121187COG3005Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunitperiplasmic nitrate reductase, cytochrome c-type protein
AE003853_475386AAF96440.15439COG3038Cytochrome B561cytochrome b561, putative
AE003853_269494AAF96160.15439COG3038Cytochrome B561cytochrome b561, putative
AE003853_500227AAF96465.19192COG3288NAD/NADP transhydrogenase alpha subunitNAD(P) transhydrogenase, alpha subunit

Excluded Genes in vibriocholerae_n16961_o1 : C
gene_idprotein_idgene_familycogcog_descriptionproduct
No results Found ...

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