Software

EVEX

EVEX is a large-scale text mining resource containing millions of biomolecular events extracted from PubMed abstracts and PubMed Central full-text articles. The data in EVEX can be accessed by pubmed ID, gene/protein symbol, Entrez Gene ID, UniProt ID or through gene families. This rich resource is distributed as a MySQL database, can be browsed via an online web application, and is accessible through an API.



Van Landeghem, S., Hakala, K., Rönnqvist, S., Salakoski, T., Van de Peer, Y., Ginter, F. (2012) Exploring Biomolecular Literature with EVEX: Connecting Genes through Events, Homology and Indirect Associations. Advances in Bioinformatics 2012:582765.




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VIB / UGent
Bioinformatics & Evolutionary Genomics
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