Horsetails are ancient polyploids: Evidence from Equisetum giganteum
Horsetails represent an enigmatic clade within the land plants. Despite consisting only of one genus (Equisetum) that contains 15 species, they are thought to represent the oldest extant genus within the vascular plants dating back possibly as far as the Triassic. Horsetails have retained several ancient features and are also characterized by a particularly high chromosome count (n = 108). Whole genome duplications (WGDs) have been uncovered in many angiosperm clades, and have been associated with the success of angiosperms both in terms of species richness and biomass dominance, but remain understudied in non-angiosperm clades. Here, we report unambiguous evidence of an ancient WGD in the fern linage, based on sequencing and de novo assembly of an expressed gene catalogue (transcriptome) from the giant horsetail (E. giganteum). We demonstrate that horsetails underwent an independent paleopolyploidy during the Late Cretaceous prior to the diversification of the genus, but did not experience any recent polyploidizations that could account for their high chromosome number. We also discuss the specific retention of genes following the WGD and how this may be linked to their long-term survival.
Vanneste, K., Sterck, L., Myburg, A.A., * Van de Peer, Y., * Mizrachi, E. (2015) Horsetails are ancient polyploids: Evidence from Equisetum giganteum. The Plant Cell 27(6):1567-78. *contributed equally
VIB / UGent
Bioinformatics & Evolutionary Genomics
+32 (0) 9 33 13807 (phone)
+32 (0) 9 33 13809 (fax)