From Genes To Organisms Via The Cell: A Problem-Solving Environment For Multicellular Development.

To gain performance, developers often build scientific applications in procedural languages, such as C or Fortran, which unfortunately reduces flexibility. To address this imbalance, the authors present CompuCell3D, a multitiered, flexible, and scalable problem-solving environment for morphogenesis simulations that's written in C++ using object-oriented design patterns.

Cickovski, T., Aras, K., Swat, M., Merks, R.M.H., Glimm, T., Hentschel, G., Alber, M., Glazier, J.A., Newman, S.A., Izaguirre, J. (2007) From Genes To Organisms Via The Cell: A Problem-Solving Environment For Multicellular Development. Comput. Sci. Eng. 9(4):50-60.









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