Publications
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Publications
Amoutzias, G., He, Y., Gordon, J., Mossialos, D., Oliver, S., Van de Peer, Y. (2010)
Posttranslational regulation impacts the fate of duplicated genes. Proc Natl Acad Sci 107, 2967-2971.
Huysman, M., Martens, C., Vandepoele, K., Gillard, J., Rayko, E., Heijde, M., Bowler, C., Inzé, D., Van de Peer, Y., De Veylder, L., Vyverman, W. (2010)
Genome-wide analysis of the diatom cell cycle unveils a novel type of cyclins involved in environmental signalling. Genome Biology 11, R17.
Abeel, T., Helleputte, T., Van de Peer, Y., Dupont, C., Saeys, Y. (2010)
Robust biomarker identification for cancer diagnosis with ensemble feature selection methods. Bioinformatics 26, 392-398.
Van de Peer, Y., Maere, S., Meyer, A. (2010)
2R or not 2R is not the question anymore. Nature Reviews Genetics 11, 166.
Rehrauer, H., Aquino, C., Gruissem, W., Henz, SR., Hilson, P., Laubinger, S., Naouar, N., Patrignani, A., Rombauts, S., Shu, C.-L., Van de Peer, Y., Vuylsteke, M., Weigel, D., Zeller, G., Hennig, L. (2010)
AGRONOMICS1: a new resource for Arabidopsis transcriptome profiling. Plant Physiol. 152, 487-499.
Baele, G., Bredeche, N., Haasdijk, E., Maere, S., Michiels, N., Van de Peer, Y., Schmickl, T., Schwarzer, C., Thenius, R. (2009)
Open-ended On-board Evolutionary Robotics for Robot Swarms. Proceedings of the 2009 IEEE Congress On Evolutionary Computation. (in press).
Kernbach, S., Hamann, K., Stradner, J., Thenius, R., Schmickl, T., van Rossum, A. C., Sebag, M., Bredeche, N., Yao, Y., Baele, G., Van de Peer, Y., Timmis, K.N., Mokhtar, M., Tyrrell, A., Eiben, A. E., McKibbin, S. P., Liu, W., Winfield, A. F. T. (2009)
On adaptive self-organization in artificial robot organisms. International Conference on Adaptive and Self-adaptive Systems and Applications (in press).
Amoutzias, G., Van de Peer, Y. (2010)
Single-Gene and Whole-Genome Duplications and the Evolution of Protein-Protein Interaction Networks. (in press).
Saeys, Y., Van Landeghem, S., Van de Peer, Y. (2010)
Event based text mining for integrated network construction. Journal of Machine Learning Research, Workshop and Conference proceedings (in press).
Armañanzas, R., Saeys, Y., Inza, I., Garcia-Torres, M., Bielza, C., Van de Peer, Y., Larrañaga, P. (2010)
Peakbin selection in mass spectrometry data using a consensus approach with estimation of distribution algorithms. IEEE/ACM Transactions on Computational Biology and Bioinformatics (In Press).
Joshi, A., Van Parys, T., Van de Peer, Y., Michoel, T. (2010)
Characterizing regulatory path motifs in integrated networks using perturbational data . Genome Biology (In Press).
Cock, M., Sterck, L., Rouzé, P., Scornet, D., Allen, A., Amoutzias, G., Anthouard, V., Artiguenave, F., Aury, J., Badger, J., Beszteri, B., Billiau, K., Bonnet, E., Bothwell, J., Bowler, C., Boyen, C., Brownlee, C., Carrano, C., Charrier, B., Youn Cho, G., Coelho, A., Colln, J., Corre, E., Da Silva, C., Delage, L., Delaroque, N., Dittami, S., Doulbeau, S., Elias, M., Farnham, G., Gachon, C., Gschloessl, B., Heesch, S., Jabbari, K., Jubin, C., Kawai, H., Kimura, K., Kloareg, B., Kpper, F., Lang, D., Le Bail, A., Leblanc, C., Lerouge, P., Lohr, M., Lopez, P., Martens, C., Maumus, F., Michel, G., MirandaSaavedra, D., Morales, J., Moreau, H., Motomura, T., Nagasato, C., Napoli, C., Nelson, D., Nyvall Colln, P., Peters, S., Pommier, C., Potin, P., Poulain, J., Quesneville, H., Read, B., Rensing, S.A., Ritter, A., Rousvoal, S., Samanta, M., Samson, G., Schroeder, D., Sgurens, B., Strittmatter, M., Tonon, T., Tregear, J., Valentin, K., von Dassow, P., Yamagishi, T., Van de Peer, Y., Wincker, P. (2010)
The Ectocarpus genome and the independent evolution of multicellularity in the brown algae. Nature (In Press).
Wischnitzki, E., Vandepoele, K., Van de Peer, Y. (2009)
Conservation of transcription factor binding sites in plants. Summerschool
Van Landeghem, S., De Baets, B., Van de Peer, Y., Saeys, Y. (2009)
Training a text miner to summarize bio-molecular interactions found in research articles. Machine Learning Summerschool
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