Brassica rapa

Brassica rapa, Chinese cabbage, is an import addition to PLAZA 3.0 for several reasons. Brassica rapa is by itself an important crop for oilseed (vegetable oil) production. Additionally its phylogenetic proximity to other brassicaceae of agricultural importance, such as turnip, cabbage and rapeseed, is of interest. Finally, brassica species have an interesting genomic history with several recent whole genome duplications and hybridizations. The brassica rapa sequence is the first step to unraveling the details how such events shape plant genomes and how the genome behaves afterwards.

Publication:
The genome of the mesopolyploid crop species Brassica rapa.Nature Genetics 43, 1035-1039 (2011)

Info and Links

Source Annotation v1.2 on assembly v1.1 (Phytozome 9.1)
PLAZA identifier bra
NCBI link Brassica rapa
Mitochondrion JF920285
Chloroplast Not available

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Annotations

Page 1 of 2050, showing 20 records out of 40998 total, starting on record 1, ending on 20

Gene Transcript Start Stop Strand Chr Type Gene family
BR00G00010BR00G00010.134384772-Scaffold000164coding HOM03D000008
BR00G00020BR00G00020.173478599-Scaffold000164coding HOM03D000096
BR00G00030BR00G00030.1990611701+Scaffold000164coding HOM03D003772
BR00G00040BR00G00040.11219714366-Scaffold000164coding HOM03D001231
BR00G00050BR00G00050.11565416379+Scaffold000164coding HOM03D001029
BR00G00060BR00G00060.11759319159-Scaffold000164coding HOM03D000008
BR00G00070BR00G00070.12874429145-Scaffold000164coding HOM03D000031
BR00G00080BR00G00080.13826238870-Scaffold000164coding HOM03D002601
BR00G00090BR00G00090.14087941190+Scaffold000164coding HOM03D004325
BR00G00100BR00G00100.14204047798+Scaffold000164coding HOM03D000137
BR00G00110BR00G00110.14893650318-Scaffold000164coding HOM03D009276
BR00G00120BR00G00120.15120051526+Scaffold000164coding HOM03D007415
BR00G00130BR00G00130.15490055919+Scaffold000164coding HOM03D000749
BR00G00140BR00G00140.16562767260+Scaffold000164coding HOM03D000140
BR00G00150BR00G00150.17164073246+Scaffold000164coding HOM03D000015
BR00G00160BR00G00160.18655887709-Scaffold000164coding HOM03D000360
BR00G00170BR00G00170.19593197373+Scaffold000164coding HOM03D005426
BR00G00180BR00G00180.198346100996-Scaffold000164coding HOM03D002357
BR00G00190BR00G00190.1102748103173-Scaffold000164coding HOM03D001342
BR00G00200BR00G00200.1103551103817+Scaffold000164coding HOM03D007584