chr1 CG SV 1604411 1604991 23 + . ID=5869;Type=interchromosomal;Left=chr1:1604411-1604991+;Right=chr2:1145894-1146228+;Distance=;DiscordantMatePairAlignments=23;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_001110781:-;NM_033486:-;NM_033487:-;NM_033488:-;NM_033489:-;NM_033492:-;NM_033493:-;RightGenes=NM_018968:+;XRef=;Frequency=0.00 chr2 CG SV 1145894 1146228 23 + . ID=5869;Type=interchromosomal;Left=chr1:1604411-1604991+;Right=chr2:1145894-1146228+;Distance=;DiscordantMatePairAlignments=23;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_001110781:-;NM_033486:-;NM_033487:-;NM_033488:-;NM_033489:-;NM_033492:-;NM_033493:-;RightGenes=NM_018968:+;XRef=;Frequency=0.00 chr1 CG SV 10482368 10484480 19 . . ID=5913;Type=deletion;Left=chr1:10482368-10482938+;Right=chr1:10484222-10484480+;Distance=1854;DiscordantMatePairAlignments=19;LeftRepeat=AluSg:SINE:Alu;RightRepeat=AluY:SINE:Alu;LeftGenes=NM_004565:+;RightGenes=NM_004565:+;XRef=;Frequency=0.00 chr1 CG SV 10482368 10482938 19 + . ID=5913;Type=deletion;Left=chr1:10482368-10482938;Right=chr1:10484222-10484480 chr1 CG SV 10484222 10484480 19 + . ID=5913;Type=deletion;Left=chr1:10482368-10482938;Right=chr1:10484222-10484480 chr1 CG SV 27875709 54313247 45 . . ID=1825;Type=probable-inversion;Left=chr1:27875709-27876317-;Right=chr1:54312586-54313247+;Distance=26436269;DiscordantMatePairAlignments=45;LeftRepeat=L1PA8:LINE:L1;RightRepeat=AluY:SINE:Alu;LeftGenes=;RightGenes=NM_153035:+;XRef=;Frequency=0.00 chr1 CG SV 27875709 27876317 45 - . ID=1825;Type=probable-inversion;Left=chr1:27875709-27876317;Right=chr1:54312586-54313247 chr1 CG SV 54312586 54313247 45 - . ID=1825;Type=probable-inversion;Left=chr1:27875709-27876317;Right=chr1:54312586-54313247 chr1 CG SV 27879335 35285025 12 . . ID=1826;Type=probable-inversion;Left=chr1:27879335-27879627-;Right=chr1:35284504-35285025+;Distance=7404877;DiscordantMatePairAlignments=12;LeftRepeat=MLT-int:LTR:MaLR;RightRepeat=AluJo:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr1 CG SV 27879335 27879627 12 - . ID=1826;Type=probable-inversion;Left=chr1:27879335-27879627;Right=chr1:35284504-35285025 chr1 CG SV 35284504 35285025 12 - . ID=1826;Type=probable-inversion;Left=chr1:27879335-27879627;Right=chr1:35284504-35285025 chr1 CG SV 33927935 33930399 94 . . ID=6213;Type=probable-inversion;Left=chr1:33927935-33928493+;Right=chr1:33929807-33930399-;Distance=2464;DiscordantMatePairAlignments=94;LeftRepeat=L1MC4:LINE:L1;RightRepeat=;LeftGenes=NM_052896:-;RightGenes=NM_052896:-;XRef=;Frequency=0.00 chr1 CG SV 33927935 33928493 94 + . ID=6213;Type=probable-inversion;Left=chr1:33927935-33928493;Right=chr1:33929807-33930399 chr1 CG SV 33929807 33930399 94 + . ID=6213;Type=probable-inversion;Left=chr1:33927935-33928493;Right=chr1:33929807-33930399 chr1 CG SV 55124018 55126800 154 . . ID=5884;Type=deletion;Left=chr1:55124018-55124681+;Right=chr1:55126193-55126800+;Distance=2175;DiscordantMatePairAlignments=154;LeftRepeat=L2:LINE:L2;Self chain;RightRepeat=L2:LINE:L2;LeftGenes=NM_014762:-;RightGenes=;XRef=;Frequency=0.00 chr1 CG SV 55124018 55124681 154 + . ID=5884;Type=deletion;Left=chr1:55124018-55124681;Right=chr1:55126193-55126800 chr1 CG SV 55126193 55126800 154 + . ID=5884;Type=deletion;Left=chr1:55124018-55124681;Right=chr1:55126193-55126800 chr1 CG SV 78811603 78812202 67 + . ID=6188;Type=interchromosomal;Left=chr1:78811603-78812202+;Right=chr4:20149198-20149767-;Distance=;DiscordantMatePairAlignments=67;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_004787:+;XRef=;Frequency=0.00 chr4 CG SV 20149198 20149767 67 + . ID=6188;Type=interchromosomal;Left=chr1:78811603-78812202+;Right=chr4:20149198-20149767-;Distance=;DiscordantMatePairAlignments=67;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_004787:+;XRef=;Frequency=0.00 chr1 CG SV 86888450 86939104 59 . . ID=2177;Type=tandem-duplication;Left=chr1:86888450-86888933-;Right=chr1:86938484-86939104-;Distance=50171;DiscordantMatePairAlignments=59;LeftRepeat=Self chain;RightRepeat=L1MA8:LINE:L1;LeftGenes=NR_024604:+;RightGenes=;XRef=;Frequency=0.00 chr1 CG SV 86888450 86888933 59 - . ID=2177;Type=tandem-duplication;Left=chr1:86888450-86888933;Right=chr1:86938484-86939104 chr1 CG SV 86938484 86939104 59 - . ID=2177;Type=tandem-duplication;Left=chr1:86888450-86888933;Right=chr1:86938484-86939104 chr1 CG SV 141906695 141907447 12 + . ID=5097;Type=interchromosomal;Left=chr1:141906695-141907447+;Right=chr2:11847365-11847496+;Distance=;DiscordantMatePairAlignments=12;LeftRepeat=SegDup;Self chain;RightRepeat=;LeftGenes=;RightGenes=NM_145693:+;XRef=;Frequency=0.00 chr2 CG SV 11847365 11847496 12 + . ID=5097;Type=interchromosomal;Left=chr1:141906695-141907447+;Right=chr2:11847365-11847496+;Distance=;DiscordantMatePairAlignments=12;LeftRepeat=SegDup;Self chain;RightRepeat=;LeftGenes=;RightGenes=NM_145693:+;XRef=;Frequency=0.00 chr1 CG SV 184030915 185060212 51 . . ID=2151;Type=tandem-duplication;Left=chr1:184030915-184031437-;Right=chr1:185059703-185060212-;Distance=1028775;DiscordantMatePairAlignments=51;LeftRepeat=;RightRepeat=;LeftGenes=NM_031935:+;RightGenes=;XRef=;Frequency=0.00 chr1 CG SV 184030915 184031437 51 - . ID=2151;Type=tandem-duplication;Left=chr1:184030915-184031437;Right=chr1:185059703-185060212 chr1 CG SV 185059703 185060212 51 - . ID=2151;Type=tandem-duplication;Left=chr1:184030915-184031437;Right=chr1:185059703-185060212 chr1 CG SV 187912364 187921208 74 . . ID=2150;Type=tandem-duplication;Left=chr1:187912364-187912877-;Right=chr1:187920747-187921208-;Distance=8331;DiscordantMatePairAlignments=74;LeftRepeat=LTR48B:LTR:ERV1;RightRepeat=MLT1L:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr1 CG SV 187912364 187912877 74 - . ID=2150;Type=tandem-duplication;Left=chr1:187912364-187912877;Right=chr1:187920747-187921208 chr1 CG SV 187920747 187921208 74 - . ID=2150;Type=tandem-duplication;Left=chr1:187912364-187912877;Right=chr1:187920747-187921208 chr1 CG SV 210557014 210934739 51 . . ID=2148;Type=tandem-duplication;Left=chr1:210557014-210557564-;Right=chr1:210934269-210934739-;Distance=377175;DiscordantMatePairAlignments=51;LeftRepeat=Charlie9:DNA:MER1_type;RightRepeat=;LeftGenes=NM_006243:+;RightGenes=NM_018664:-;XRef=;Frequency=0.00 chr1 CG SV 210557014 210557564 51 - . ID=2148;Type=tandem-duplication;Left=chr1:210557014-210557564;Right=chr1:210934269-210934739 chr1 CG SV 210934269 210934739 51 - . ID=2148;Type=tandem-duplication;Left=chr1:210557014-210557564;Right=chr1:210934269-210934739 chr1 CG SV 243470061 243489819 43 . . ID=2145;Type=tandem-duplication;Left=chr1:243470061-243470595-;Right=chr1:243489193-243489819-;Distance=19224;DiscordantMatePairAlignments=43;LeftRepeat=;RightRepeat=AluJb:SINE:Alu;LeftGenes=NM_018012:+;RightGenes=NM_018012:+;XRef=;Frequency=0.00 chr1 CG SV 243470061 243470595 43 - . ID=2145;Type=tandem-duplication;Left=chr1:243470061-243470595;Right=chr1:243489193-243489819 chr1 CG SV 243489193 243489819 43 - . ID=2145;Type=tandem-duplication;Left=chr1:243470061-243470595;Right=chr1:243489193-243489819 chr2 CG SV 62467753 62471480 22 . . ID=919;Type=probable-inversion;Left=chr2:62467753-62468320-;Right=chr2:62471146-62471480+;Distance=2826;DiscordantMatePairAlignments=22;LeftRepeat=AluSq:SINE:Alu;RightRepeat=AluSx:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr2 CG SV 62467753 62468320 22 - . ID=919;Type=probable-inversion;Left=chr2:62467753-62468320;Right=chr2:62471146-62471480 chr2 CG SV 62471146 62471480 22 - . ID=919;Type=probable-inversion;Left=chr2:62467753-62468320;Right=chr2:62471146-62471480 chr2 CG SV 116690143 116694898 15 . . ID=2044;Type=tandem-duplication;Left=chr2:116690143-116690611-;Right=chr2:116694614-116694898-;Distance=4287;DiscordantMatePairAlignments=15;LeftRepeat=;RightRepeat=L1M4c:LINE:L1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr2 CG SV 116690143 116690611 15 - . ID=2044;Type=tandem-duplication;Left=chr2:116690143-116690611;Right=chr2:116694614-116694898 chr2 CG SV 116694614 116694898 15 - . ID=2044;Type=tandem-duplication;Left=chr2:116690143-116690611;Right=chr2:116694614-116694898 chr2 CG SV 132747163 132747594 220 + . ID=5636;Type=interchromosomal;Left=chr2:132747163-132747594+;Right=chr16:33862766-33863532-;Distance=;DiscordantMatePairAlignments=220;LeftRepeat=SegDup;Self chain;RightRepeat=SegDup;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr16 CG SV 33862766 33863532 220 + . ID=5636;Type=interchromosomal;Left=chr2:132747163-132747594+;Right=chr16:33862766-33863532-;Distance=;DiscordantMatePairAlignments=220;LeftRepeat=SegDup;Self chain;RightRepeat=SegDup;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr2 CG SV 133856337 134185500 87 . . ID=2034;Type=tandem-duplication;Left=chr2:133856337-133856722-;Right=chr2:134184800-134185500-;Distance=328778;DiscordantMatePairAlignments=87;LeftRepeat=L2:LINE:L2;RightRepeat=;LeftGenes=NM_207363:-;NM_207481:-;RightGenes=;XRef=;Frequency=0.00 chr2 CG SV 133856337 133856722 87 - . ID=2034;Type=tandem-duplication;Left=chr2:133856337-133856722;Right=chr2:134184800-134185500 chr2 CG SV 134184800 134185500 87 - . ID=2034;Type=tandem-duplication;Left=chr2:133856337-133856722;Right=chr2:134184800-134185500 chr2 CG SV 141292311 141307175 43 . . ID=4905;Type=deletion;Left=chr2:141292311-141292817+;Right=chr2:141306668-141307175+;Distance=14357;DiscordantMatePairAlignments=43;LeftRepeat=;RightRepeat=L1MA4:LINE:L1;LeftGenes=NM_018557:-;RightGenes=NM_018557:-;XRef=;Frequency=0.00 chr2 CG SV 141292311 141292817 43 + . ID=4905;Type=deletion;Left=chr2:141292311-141292817;Right=chr2:141306668-141307175 chr2 CG SV 141306668 141307175 43 + . ID=4905;Type=deletion;Left=chr2:141292311-141292817;Right=chr2:141306668-141307175 chr2 CG SV 141516602 141791793 93 . . ID=4903;Type=complex;Left=chr2:141516602-141517270+;Right=chr2:141791303-141791793+;Distance=274701;DiscordantMatePairAlignments=93;LeftRepeat=LTR40a:LTR:ERVL;RightRepeat=MLT1B:LTR:MaLR;LeftGenes=NM_018557:-;RightGenes=NM_018557:-;XRef=;Frequency=0.00 chr2 CG SV 141516602 141517270 93 + . ID=4903;Type=complex;Left=chr2:141516602-141517270;Right=chr2:141791303-141791793 chr2 CG SV 141791303 141791793 93 + . ID=4903;Type=complex;Left=chr2:141516602-141517270;Right=chr2:141791303-141791793 chr2 CG SV 141516966 141842885 77 . . ID=4900;Type=complex;Left=chr2:141516966-141517558+;Right=chr2:141842341-141842885+;Distance=325375;DiscordantMatePairAlignments=77;LeftRepeat=;RightRepeat=;LeftGenes=NM_018557:-;RightGenes=NM_018557:-;XRef=;Frequency=0.00 chr2 CG SV 141516966 141517558 77 + . ID=4900;Type=complex;Left=chr2:141516966-141517558;Right=chr2:141842341-141842885 chr2 CG SV 141842341 141842885 77 + . ID=4900;Type=complex;Left=chr2:141516966-141517558;Right=chr2:141842341-141842885 chr2 CG SV 142095481 142359018 26 . . ID=4897;Type=deletion;Left=chr2:142095481-142095956+;Right=chr2:142358008-142359018+;Distance=262527;DiscordantMatePairAlignments=26;LeftRepeat=;RightRepeat=;LeftGenes=NM_018557:-;RightGenes=NM_018557:-;XRef=;Frequency=0.00 chr2 CG SV 142095481 142095956 26 + . ID=4897;Type=deletion;Left=chr2:142095481-142095956;Right=chr2:142358008-142359018 chr2 CG SV 142358008 142359018 26 + . ID=4897;Type=deletion;Left=chr2:142095481-142095956;Right=chr2:142358008-142359018 chr2 CG SV 144043944 144045058 59 . . ID=4896;Type=distal-duplication;Left=chr2:144043944-144044470+;Right=chr2:144044480-144045058+;Distance=536;DiscordantMatePairAlignments=59;LeftRepeat=;RightRepeat=;LeftGenes=NM_018460:+;RightGenes=NM_018460:+;XRef=;Frequency=0.00 chr2 CG SV 144043944 144044470 59 + . ID=4896;Type=distal-duplication;Left=chr2:144043944-144044470;Right=chr2:144044480-144045058 chr2 CG SV 144044480 144045058 59 + . ID=4896;Type=distal-duplication;Left=chr2:144043944-144044470;Right=chr2:144044480-144045058 chr2 CG SV 144043485 144058641 36 . . ID=2032;Type=distal-duplication;Left=chr2:144043485-144043948-;Right=chr2:144058068-144058641-;Distance=14693;DiscordantMatePairAlignments=36;LeftRepeat=MIRb:SINE:MIR;RightRepeat=AluSx:SINE:Alu;LeftGenes=NM_018460:+;RightGenes=NM_018460:+;XRef=;Frequency=0.00 chr2 CG SV 144043485 144043948 36 - . ID=2032;Type=distal-duplication;Left=chr2:144043485-144043948;Right=chr2:144058068-144058641 chr2 CG SV 144058068 144058641 36 - . ID=2032;Type=distal-duplication;Left=chr2:144043485-144043948;Right=chr2:144058068-144058641 chr2 CG SV 153753993 153755443 33 . . ID=2025;Type=tandem-duplication;Left=chr2:153753993-153754485-;Right=chr2:153754867-153755443-;Distance=958;DiscordantMatePairAlignments=33;LeftRepeat=L1MA4A:LINE:L1;RightRepeat=L1MA4A:LINE:L1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr2 CG SV 153753993 153754485 33 - . ID=2025;Type=tandem-duplication;Left=chr2:153753993-153754485;Right=chr2:153754867-153755443 chr2 CG SV 153754867 153755443 33 - . ID=2025;Type=tandem-duplication;Left=chr2:153753993-153754485;Right=chr2:153754867-153755443 chr2 CG SV 184030015 184031410 65 . . ID=4864;Type=deletion;Left=chr2:184030015-184030573+;Right=chr2:184030887-184031410+;Distance=872;DiscordantMatePairAlignments=65;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr2 CG SV 184030015 184030573 65 + . ID=4864;Type=deletion;Left=chr2:184030015-184030573;Right=chr2:184030887-184031410 chr2 CG SV 184030887 184031410 65 + . ID=4864;Type=deletion;Left=chr2:184030015-184030573;Right=chr2:184030887-184031410 chr2 CG SV 212489917 212536446 75 . . ID=4851;Type=deletion;Left=chr2:212489917-212490410+;Right=chr2:212535912-212536446+;Distance=45995;DiscordantMatePairAlignments=75;LeftRepeat=;RightRepeat=;LeftGenes=NM_001042599:-;NM_005235:-;RightGenes=NM_001042599:-;NM_005235:-;XRef=;Frequency=0.00 chr2 CG SV 212489917 212490410 75 + . ID=4851;Type=deletion;Left=chr2:212489917-212490410;Right=chr2:212535912-212536446 chr2 CG SV 212535912 212536446 75 + . ID=4851;Type=deletion;Left=chr2:212489917-212490410;Right=chr2:212535912-212536446 chr2 CG SV 212793182 212933181 54 . . ID=4849;Type=deletion;Left=chr2:212793182-212793792+;Right=chr2:212932647-212933181+;Distance=139465;DiscordantMatePairAlignments=54;LeftRepeat=;RightRepeat=;LeftGenes=NM_001042599:-;NM_005235:-;RightGenes=NM_001042599:-;NM_005235:-;XRef=;Frequency=0.00 chr2 CG SV 212793182 212793792 54 + . ID=4849;Type=deletion;Left=chr2:212793182-212793792;Right=chr2:212932647-212933181 chr2 CG SV 212932647 212933181 54 + . ID=4849;Type=deletion;Left=chr2:212793182-212793792;Right=chr2:212932647-212933181 chr2 CG SV 240288764 240311596 62 . . ID=2022;Type=tandem-duplication;Left=chr2:240288764-240289311-;Right=chr2:240311185-240311596-;Distance=22285;DiscordantMatePairAlignments=62;LeftRepeat=L1ME3B:LINE:L1;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr2 CG SV 240288764 240289311 62 - . ID=2022;Type=tandem-duplication;Left=chr2:240288764-240289311;Right=chr2:240311185-240311596 chr2 CG SV 240311185 240311596 62 - . ID=2022;Type=tandem-duplication;Left=chr2:240288764-240289311;Right=chr2:240311185-240311596 chr3 CG SV 2908507 3274706 54 . . ID=4816;Type=deletion;Left=chr3:2908507-2909163+;Right=chr3:3274238-3274706+;Distance=365731;DiscordantMatePairAlignments=54;LeftRepeat=L2:LINE:L2;RightRepeat=;LeftGenes=NM_175607:+;RightGenes=;XRef=;Frequency=0.00 chr3 CG SV 2908507 2909163 54 + . ID=4816;Type=deletion;Left=chr3:2908507-2909163;Right=chr3:3274238-3274706 chr3 CG SV 3274238 3274706 54 + . ID=4816;Type=deletion;Left=chr3:2908507-2909163;Right=chr3:3274238-3274706 chr3 CG SV 8848916 37107563 63 . . ID=865;Type=probable-inversion;Left=chr3:8848916-8849562-;Right=chr3:37106868-37107563+;Distance=28257306;DiscordantMatePairAlignments=63;LeftRepeat=AluJb:SINE:Alu;RightRepeat=AluSx:SINE:Alu;LeftGenes=;RightGenes=NM_001134369:-;NM_006309:-;NM_017724:-;XRef=;Frequency=0.00 chr3 CG SV 8848916 8849562 63 - . ID=865;Type=probable-inversion;Left=chr3:8848916-8849562;Right=chr3:37106868-37107563 chr3 CG SV 37106868 37107563 63 - . ID=865;Type=probable-inversion;Left=chr3:8848916-8849562;Right=chr3:37106868-37107563 chr3 CG SV 8874930 37199905 74 . . ID=6101;Type=probable-inversion;Left=chr3:8874930-8875585+;Right=chr3:37199361-37199905-;Distance=28324975;DiscordantMatePairAlignments=74;LeftRepeat=ERVL-B2:LTR:ERVL;RightRepeat=MLT1K:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr3 CG SV 8874930 8875585 74 + . ID=6101;Type=probable-inversion;Left=chr3:8874930-8875585;Right=chr3:37199361-37199905 chr3 CG SV 37199361 37199905 74 + . ID=6101;Type=probable-inversion;Left=chr3:8874930-8875585;Right=chr3:37199361-37199905 chr3 CG SV 30472559 30474195 15 . . ID=6096;Type=probable-inversion;Left=chr3:30472559-30473059+;Right=chr3:30474059-30474195-;Distance=1636;DiscordantMatePairAlignments=15;LeftRepeat=MLT1K:LTR:MaLR;RightRepeat=MIRb:SINE:MIR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr3 CG SV 30472559 30473059 15 + . ID=6096;Type=probable-inversion;Left=chr3:30472559-30473059;Right=chr3:30474059-30474195 chr3 CG SV 30474059 30474195 15 + . ID=6096;Type=probable-inversion;Left=chr3:30472559-30473059;Right=chr3:30474059-30474195 chr3 CG SV 41159179 41203932 126 . . ID=2011;Type=tandem-duplication;Left=chr3:41159179-41159818-;Right=chr3:41203420-41203932-;Distance=44114;DiscordantMatePairAlignments=126;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr3 CG SV 41159179 41159818 126 - . ID=2011;Type=tandem-duplication;Left=chr3:41159179-41159818;Right=chr3:41203420-41203932 chr3 CG SV 41203420 41203932 126 - . ID=2011;Type=tandem-duplication;Left=chr3:41159179-41159818;Right=chr3:41203420-41203932 chr3 CG SV 59791166 60398725 64 . . ID=4748;Type=deletion;Left=chr3:59791166-59791765+;Right=chr3:60398110-60398725+;Distance=606944;DiscordantMatePairAlignments=64;LeftRepeat=;RightRepeat=;LeftGenes=NM_001166243:-;NM_002012:-;RightGenes=NM_001166243:-;NM_002012:-;XRef=;Frequency=0.00 chr3 CG SV 59791166 59791765 64 + . ID=4748;Type=deletion;Left=chr3:59791166-59791765;Right=chr3:60398110-60398725 chr3 CG SV 60398110 60398725 64 + . ID=4748;Type=deletion;Left=chr3:59791166-59791765;Right=chr3:60398110-60398725 chr3 CG SV 59937929 60127589 104 . . ID=2010;Type=tandem-duplication;Left=chr3:59937929-59938455-;Right=chr3:60127006-60127589-;Distance=189134;DiscordantMatePairAlignments=104;LeftRepeat=;RightRepeat=;LeftGenes=NM_001166243:-;NM_002012:-;RightGenes=NM_001166243:-;NM_002012:-;XRef=;Frequency=0.00 chr3 CG SV 59937929 59938455 104 - . ID=2010;Type=tandem-duplication;Left=chr3:59937929-59938455;Right=chr3:60127006-60127589 chr3 CG SV 60127006 60127589 104 - . ID=2010;Type=tandem-duplication;Left=chr3:59937929-59938455;Right=chr3:60127006-60127589 chr3 CG SV 60883299 60940514 89 . . ID=4744;Type=deletion;Left=chr3:60883299-60883977+;Right=chr3:60939556-60940514+;Distance=56257;DiscordantMatePairAlignments=89;LeftRepeat=;RightRepeat=;LeftGenes=NM_001166243:-;NM_002012:-;RightGenes=NM_001166243:-;NM_002012:-;XRef=;Frequency=0.00 chr3 CG SV 60883299 60883977 89 + . ID=4744;Type=deletion;Left=chr3:60883299-60883977;Right=chr3:60939556-60940514 chr3 CG SV 60939556 60940514 89 + . ID=4744;Type=deletion;Left=chr3:60883299-60883977;Right=chr3:60939556-60940514 chr3 CG SV 76724461 76754050 33 . . ID=4731;Type=deletion;Left=chr3:76724461-76725068+;Right=chr3:76753800-76754050+;Distance=29339;DiscordantMatePairAlignments=33;LeftRepeat=MLT1E2:LTR:MaLR;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr3 CG SV 76724461 76725068 33 + . ID=4731;Type=deletion;Left=chr3:76724461-76725068;Right=chr3:76753800-76754050 chr3 CG SV 76753800 76754050 33 + . ID=4731;Type=deletion;Left=chr3:76724461-76725068;Right=chr3:76753800-76754050 chr3 CG SV 77322425 77326140 63 . . ID=4727;Type=deletion;Left=chr3:77322425-77322965+;Right=chr3:77325575-77326140+;Distance=3150;DiscordantMatePairAlignments=63;LeftRepeat=;RightRepeat=;LeftGenes=NM_001128929:+;NM_002942:+;RightGenes=NM_001128929:+;NM_002942:+;XRef=;Frequency=0.00 chr3 CG SV 77322425 77322965 63 + . ID=4727;Type=deletion;Left=chr3:77322425-77322965;Right=chr3:77325575-77326140 chr3 CG SV 77325575 77326140 63 + . ID=4727;Type=deletion;Left=chr3:77322425-77322965;Right=chr3:77325575-77326140 chr3 CG SV 84620292 84628664 38 . . ID=2004;Type=tandem-duplication;Left=chr3:84620292-84620803-;Right=chr3:84628084-84628664-;Distance=7861;DiscordantMatePairAlignments=38;LeftRepeat=L1MB1:LINE:L1;RightRepeat=L1MC2:LINE:L1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr3 CG SV 84620292 84620803 38 - . ID=2004;Type=tandem-duplication;Left=chr3:84620292-84620803;Right=chr3:84628084-84628664 chr3 CG SV 84628084 84628664 38 - . ID=2004;Type=tandem-duplication;Left=chr3:84620292-84620803;Right=chr3:84628084-84628664 chr3 CG SV 85257840 85261144 39 . . ID=4722;Type=deletion;Left=chr3:85257840-85258266+;Right=chr3:85260586-85261144+;Distance=2746;DiscordantMatePairAlignments=39;LeftRepeat=;RightRepeat=;LeftGenes=NM_001167674:+;NM_001167675:+;RightGenes=NM_001167674:+;NM_001167675:+;XRef=;Frequency=0.00 chr3 CG SV 85257840 85258266 39 + . ID=4722;Type=deletion;Left=chr3:85257840-85258266;Right=chr3:85260586-85261144 chr3 CG SV 85260586 85261144 39 + . ID=4722;Type=deletion;Left=chr3:85257840-85258266;Right=chr3:85260586-85261144 chr3 CG SV 98113460 98213706 20 . . ID=4718;Type=deletion;Left=chr3:98113460-98113911+;Right=chr3:98213330-98213706+;Distance=99870;DiscordantMatePairAlignments=20;LeftRepeat=;RightRepeat=L1PA16:LINE:L1;Self chain;LeftGenes=NM_001080448:+;RightGenes=NM_001080448:+;XRef=;Frequency=0.00 chr3 CG SV 98113460 98113911 20 + . ID=4718;Type=deletion;Left=chr3:98113460-98113911;Right=chr3:98213330-98213706 chr3 CG SV 98213330 98213706 20 + . ID=4718;Type=deletion;Left=chr3:98113460-98113911;Right=chr3:98213330-98213706 chr3 CG SV 114280944 114281021 25 - . ID=568;Type=complex;Left=chr3:114280944-114281021-;Right=chr16:87318514-87319224+;Distance=;DiscordantMatePairAlignments=25;LeftRepeat=;RightRepeat=AluSc:SINE:Alu;Self chain;LeftGenes=;RightGenes=NM_001142864:-;XRef=;Frequency=0.00 chr16 CG SV 87318514 87319224 25 - . ID=568;Type=complex;Left=chr3:114280944-114281021-;Right=chr16:87318514-87319224+;Distance=;DiscordantMatePairAlignments=25;LeftRepeat=;RightRepeat=AluSc:SINE:Alu;Self chain;LeftGenes=;RightGenes=NM_001142864:-;XRef=;Frequency=0.00 chr3 CG SV 114281099 114473354 19 . . ID=6088;Type=complex;Left=chr3:114281099-114281180+;Right=chr3:114472746-114473354-;Distance=192255;DiscordantMatePairAlignments=19;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_033254:+;XRef=;Frequency=0.00 chr3 CG SV 114281099 114281180 19 + . ID=6088;Type=complex;Left=chr3:114281099-114281180;Right=chr3:114472746-114473354 chr3 CG SV 114472746 114473354 19 + . ID=6088;Type=complex;Left=chr3:114281099-114281180;Right=chr3:114472746-114473354 chr3 CG SV 114280591 114473750 111 . . ID=851;Type=complex;Left=chr3:114280591-114281108-;Right=chr3:114473371-114473750+;Distance=192263;DiscordantMatePairAlignments=111;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_033254:+;XRef=;Frequency=0.00 chr3 CG SV 114280591 114281108 111 - . ID=851;Type=complex;Left=chr3:114280591-114281108;Right=chr3:114473371-114473750 chr3 CG SV 114473371 114473750 111 - . ID=851;Type=complex;Left=chr3:114280591-114281108;Right=chr3:114473371-114473750 chr3 CG SV 114473362 114473833 61 + . ID=4346;Type=complex;Left=chr3:114473362-114473833+;Right=chr16:87318511-87319065+;Distance=;DiscordantMatePairAlignments=61;LeftRepeat=;RightRepeat=AluSc:SINE:Alu;Self chain;LeftGenes=NM_033254:+;RightGenes=NM_001142864:-;XRef=;Frequency=0.00 chr16 CG SV 87318511 87319065 61 + . ID=4346;Type=complex;Left=chr3:114473362-114473833+;Right=chr16:87318511-87319065+;Distance=;DiscordantMatePairAlignments=61;LeftRepeat=;RightRepeat=AluSc:SINE:Alu;Self chain;LeftGenes=NM_033254:+;RightGenes=NM_001142864:-;XRef=;Frequency=0.00 chr3 CG SV 115578945 115585571 13 . . ID=850;Type=complex;Left=chr3:115578945-115579032-;Right=chr3:115584975-115585571+;Distance=5943;DiscordantMatePairAlignments=13;LeftRepeat=Self chain;RightRepeat=;LeftGenes=NM_001164342:-;NM_001164343:-;NM_001164344:-;NM_001164345:-;NM_001164346:-;NM_001164347:-;NM_015642:-;RightGenes=NM_001164342:-;NM_001164343:-;NM_001164344:-;NM_001164345:-;NM_001164346:-;NM_001164347:-;NM_015642:-;XRef=;Frequency=0.00 chr3 CG SV 115578945 115579032 13 - . ID=850;Type=complex;Left=chr3:115578945-115579032;Right=chr3:115584975-115585571 chr3 CG SV 115584975 115585571 13 - . ID=850;Type=complex;Left=chr3:115578945-115579032;Right=chr3:115584975-115585571 chr3 CG SV 115579124 115582247 16 . . ID=6087;Type=complex;Left=chr3:115579124-115579205+;Right=chr3:115581488-115582247-;Distance=3123;DiscordantMatePairAlignments=16;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_001164342:-;NM_001164343:-;NM_001164344:-;NM_001164345:-;NM_001164346:-;NM_001164347:-;NM_015642:-;RightGenes=NM_001164342:-;NM_001164343:-;NM_001164344:-;NM_001164345:-;NM_001164346:-;NM_001164347:-;NM_015642:-;XRef=;Frequency=0.00 chr3 CG SV 115579124 115579205 16 + . ID=6087;Type=complex;Left=chr3:115579124-115579205;Right=chr3:115581488-115582247 chr3 CG SV 115581488 115582247 16 + . ID=6087;Type=complex;Left=chr3:115579124-115579205;Right=chr3:115581488-115582247 chr3 CG SV 115582255 115585464 104 . . ID=4703;Type=complex;Left=chr3:115582255-115583008+;Right=chr3:115584973-115585464+;Distance=2718;DiscordantMatePairAlignments=104;LeftRepeat=Self chain;RightRepeat=;LeftGenes=NM_001164342:-;NM_001164343:-;NM_001164344:-;NM_001164345:-;NM_001164346:-;NM_001164347:-;NM_015642:-;RightGenes=NM_001164342:-;NM_001164343:-;NM_001164344:-;NM_001164345:-;NM_001164346:-;NM_001164347:-;NM_015642:-;XRef=;Frequency=0.00 chr3 CG SV 115582255 115583008 104 + . ID=4703;Type=complex;Left=chr3:115582255-115583008;Right=chr3:115584973-115585464 chr3 CG SV 115584973 115585464 104 + . ID=4703;Type=complex;Left=chr3:115582255-115583008;Right=chr3:115584973-115585464 chr3 CG SV 117837589 117931958 92 . . ID=4699;Type=deletion;Left=chr3:117837589-117838070+;Right=chr3:117931363-117931958+;Distance=93774;DiscordantMatePairAlignments=92;LeftRepeat=MER20:DNA:MER1_type;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr3 CG SV 117837589 117838070 92 + . ID=4699;Type=deletion;Left=chr3:117837589-117838070;Right=chr3:117931363-117931958 chr3 CG SV 117931363 117931958 92 + . ID=4699;Type=deletion;Left=chr3:117837589-117838070;Right=chr3:117931363-117931958 chr3 CG SV 117955761 117997098 74 . . ID=4698;Type=deletion;Left=chr3:117955761-117956319+;Right=chr3:117996544-117997098+;Distance=40783;DiscordantMatePairAlignments=74;LeftRepeat=L2:LINE:L2;RightRepeat=AluY:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr3 CG SV 117955761 117956319 74 + . ID=4698;Type=deletion;Left=chr3:117955761-117956319;Right=chr3:117996544-117997098 chr3 CG SV 117996544 117997098 74 + . ID=4698;Type=deletion;Left=chr3:117955761-117956319;Right=chr3:117996544-117997098 chr3 CG SV 118128716 118278392 13 . . ID=4696;Type=deletion;Left=chr3:118128716-118129227+;Right=chr3:118277792-118278392+;Distance=149076;DiscordantMatePairAlignments=13;LeftRepeat=L1PA7:LINE:L1;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr3 CG SV 118128716 118129227 13 + . ID=4696;Type=deletion;Left=chr3:118128716-118129227;Right=chr3:118277792-118278392 chr3 CG SV 118277792 118278392 13 + . ID=4696;Type=deletion;Left=chr3:118128716-118129227;Right=chr3:118277792-118278392 chr3 CG SV 143846756 145059367 59 . . ID=2000;Type=tandem-duplication;Left=chr3:143846756-143847257-;Right=chr3:145058906-145059367-;Distance=1212110;DiscordantMatePairAlignments=59;LeftRepeat=;RightRepeat=L1PB2:LINE:L1;LeftGenes=NM_001145319:+;NM_002670:+;RightGenes=;XRef=;Frequency=0.00 chr3 CG SV 143846756 143847257 59 - . ID=2000;Type=tandem-duplication;Left=chr3:143846756-143847257;Right=chr3:145058906-145059367 chr3 CG SV 145058906 145059367 59 - . ID=2000;Type=tandem-duplication;Left=chr3:143846756-143847257;Right=chr3:145058906-145059367 chr3 CG SV 175385771 175474457 76 . . ID=1998;Type=tandem-duplication;Left=chr3:175385771-175386386-;Right=chr3:175473784-175474457-;Distance=88071;DiscordantMatePairAlignments=76;LeftRepeat=;RightRepeat=;LeftGenes=NM_014932:+;RightGenes=NM_014932:+;XRef=;Frequency=0.00 chr3 CG SV 175385771 175386386 76 - . ID=1998;Type=tandem-duplication;Left=chr3:175385771-175386386;Right=chr3:175473784-175474457 chr3 CG SV 175473784 175474457 76 - . ID=1998;Type=tandem-duplication;Left=chr3:175385771-175386386;Right=chr3:175473784-175474457 chr3 CG SV 186998780 186999263 17 - . ID=1759;Type=interchromosomal;Left=chr3:186998780-186999263-;Right=chr12:73463413-73463942-;Distance=;DiscordantMatePairAlignments=17;LeftRepeat=AluJb:SINE:Alu;Self chain;RightRepeat=;LeftGenes=NM_001007225:-;NM_006548:-;RightGenes=;XRef=;Frequency=0.00 chr12 CG SV 73463413 73463942 17 - . ID=1759;Type=interchromosomal;Left=chr3:186998780-186999263-;Right=chr12:73463413-73463942-;Distance=;DiscordantMatePairAlignments=17;LeftRepeat=AluJb:SINE:Alu;Self chain;RightRepeat=;LeftGenes=NM_001007225:-;NM_006548:-;RightGenes=;XRef=;Frequency=0.00 chr4 CG SV 89613 95923 55 . . ID=843;Type=probable-inversion;Left=chr4:89613-90294-;Right=chr4:95430-95923+;Distance=5136;DiscordantMatePairAlignments=55;LeftRepeat=MER61C-int:LTR:ERV1;Self chain;RightRepeat=Self chain;LeftGenes=NM_001039127:+;RightGenes=NM_001039127:+;XRef=;Frequency=0.00 chr4 CG SV 89613 90294 55 - . ID=843;Type=probable-inversion;Left=chr4:89613-90294;Right=chr4:95430-95923 chr4 CG SV 95430 95923 55 - . ID=843;Type=probable-inversion;Left=chr4:89613-90294;Right=chr4:95430-95923 chr4 CG SV 33957965 33974006 33 . . ID=4614;Type=deletion;Left=chr4:33957965-33958505+;Right=chr4:33973536-33974006+;Distance=15571;DiscordantMatePairAlignments=33;LeftRepeat=L1PBa:LINE:L1;RightRepeat=AluSc:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr4 CG SV 33957965 33958505 33 + . ID=4614;Type=deletion;Left=chr4:33957965-33958505;Right=chr4:33973536-33974006 chr4 CG SV 33973536 33974006 33 + . ID=4614;Type=deletion;Left=chr4:33957965-33958505;Right=chr4:33973536-33974006 chr4 CG SV 41302912 181820093 54 . . ID=1980;Type=tandem-duplication;Left=chr4:41302912-41303589-;Right=chr4:181819648-181820093-;Distance=140516504;DiscordantMatePairAlignments=54;LeftRepeat=AluSx:SINE:Alu;RightRepeat=;LeftGenes=NM_001112717:+;NM_001112718:+;NM_014988:+;RightGenes=;XRef=;Frequency=0.00 chr4 CG SV 41302912 41303589 54 - . ID=1980;Type=tandem-duplication;Left=chr4:41302912-41303589;Right=chr4:181819648-181820093 chr4 CG SV 181819648 181820093 54 - . ID=1980;Type=tandem-duplication;Left=chr4:41302912-41303589;Right=chr4:181819648-181820093 chr4 CG SV 43151963 127741229 98 . . ID=838;Type=probable-inversion;Left=chr4:43151963-43152461-;Right=chr4:127740545-127741229+;Distance=84588084;DiscordantMatePairAlignments=98;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr4 CG SV 43151963 43152461 98 - . ID=838;Type=probable-inversion;Left=chr4:43151963-43152461;Right=chr4:127740545-127741229 chr4 CG SV 127740545 127741229 98 - . ID=838;Type=probable-inversion;Left=chr4:43151963-43152461;Right=chr4:127740545-127741229 chr4 CG SV 43407539 43970988 34 . . ID=1992;Type=tandem-duplication;Left=chr4:43407539-43408033-;Right=chr4:43970651-43970988-;Distance=562955;DiscordantMatePairAlignments=34;LeftRepeat=AluSx:SINE:Alu;RightRepeat=;LeftGenes=;RightGenes=NM_198353:-;XRef=;Frequency=0.00 chr4 CG SV 43407539 43408033 34 - . ID=1992;Type=tandem-duplication;Left=chr4:43407539-43408033;Right=chr4:43970651-43970988 chr4 CG SV 43970651 43970988 34 - . ID=1992;Type=tandem-duplication;Left=chr4:43407539-43408033;Right=chr4:43970651-43970988 chr4 CG SV 43559026 43559437 24 + . ID=4545;Type=interchromosomal;Left=chr4:43559026-43559437+;Right=chr5:163279472-163279935+;Distance=;DiscordantMatePairAlignments=24;LeftRepeat=;RightRepeat=MLT-int:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr5 CG SV 163279472 163279935 24 + . ID=4545;Type=interchromosomal;Left=chr4:43559026-43559437+;Right=chr5:163279472-163279935+;Distance=;DiscordantMatePairAlignments=24;LeftRepeat=;RightRepeat=MLT-int:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr4 CG SV 87936587 87992097 62 . . ID=1983;Type=tandem-duplication;Left=chr4:87936587-87936887-;Right=chr4:87991523-87992097-;Distance=55210;DiscordantMatePairAlignments=62;LeftRepeat=;RightRepeat=;LeftGenes=NM_006264:+;NM_080683:+;NM_080684:+;NM_080685:+;RightGenes=;XRef=;Frequency=0.00 chr4 CG SV 87936587 87936887 62 - . ID=1983;Type=tandem-duplication;Left=chr4:87936587-87936887;Right=chr4:87991523-87992097 chr4 CG SV 87991523 87992097 62 - . ID=1983;Type=tandem-duplication;Left=chr4:87936587-87936887;Right=chr4:87991523-87992097 chr4 CG SV 91978522 92025527 23 . . ID=4586;Type=deletion;Left=chr4:91978522-91978981+;Right=chr4:92025038-92025527+;Distance=46516;DiscordantMatePairAlignments=23;LeftRepeat=;RightRepeat=L2:LINE:L2;LeftGenes=NM_001145065:+;RightGenes=NM_001145065:+;XRef=;Frequency=0.00 chr4 CG SV 91978522 91978981 23 + . ID=4586;Type=deletion;Left=chr4:91978522-91978981;Right=chr4:92025038-92025527 chr4 CG SV 92025038 92025527 23 + . ID=4586;Type=deletion;Left=chr4:91978522-91978981;Right=chr4:92025038-92025527 chr4 CG SV 108101479 108102137 136 - . ID=530;Type=complex;Left=chr4:108101479-108102137-;Right=chr22:27395610-27396123+;Distance=;DiscordantMatePairAlignments=136;LeftRepeat=;RightRepeat=;LeftGenes=NM_014421:-;RightGenes=NM_001145418:-;XRef=;Frequency=0.00 chr22 CG SV 27395610 27396123 136 - . ID=530;Type=complex;Left=chr4:108101479-108102137-;Right=chr22:27395610-27396123+;Distance=;DiscordantMatePairAlignments=136;LeftRepeat=;RightRepeat=;LeftGenes=NM_014421:-;RightGenes=NM_001145418:-;XRef=;Frequency=0.00 chr4 CG SV 123348281 123351466 127 . . ID=4564;Type=deletion;Left=chr4:123348281-123348903+;Right=chr4:123350932-123351466+;Distance=2651;DiscordantMatePairAlignments=127;LeftRepeat=;RightRepeat=;LeftGenes=NM_015312:+;RightGenes=NM_015312:+;XRef=;Frequency=0.00 chr4 CG SV 123348281 123348903 127 + . ID=4564;Type=deletion;Left=chr4:123348281-123348903;Right=chr4:123350932-123351466 chr4 CG SV 123350932 123351466 127 + . ID=4564;Type=deletion;Left=chr4:123348281-123348903;Right=chr4:123350932-123351466 chr4 CG SV 137282833 137283452 51 - . ID=831;Type=interchromosomal;Left=chr4:137282833-137283452-;Right=chr6:32978878-32979412+;Distance=;DiscordantMatePairAlignments=51;LeftRepeat=;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr6 CG SV 32978878 32979412 51 - . ID=831;Type=interchromosomal;Left=chr4:137282833-137283452-;Right=chr6:32978878-32979412+;Distance=;DiscordantMatePairAlignments=51;LeftRepeat=;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr4 CG SV 172645648 172649137 18 . . ID=1692;Type=tandem-duplication;Left=chr4:172645648-172646047-;Right=chr4:172648699-172649137-;Distance=3090;DiscordantMatePairAlignments=18;LeftRepeat=AluSx:SINE:Alu;Self chain;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr4 CG SV 172645648 172646047 18 - . ID=1692;Type=tandem-duplication;Left=chr4:172645648-172646047;Right=chr4:172648699-172649137 chr4 CG SV 172648699 172649137 18 - . ID=1692;Type=tandem-duplication;Left=chr4:172645648-172646047;Right=chr4:172648699-172649137 chr4 CG SV 180317574 180348908 60 . . ID=1690;Type=tandem-duplication;Left=chr4:180317574-180318145-;Right=chr4:180348356-180348908-;Distance=30763;DiscordantMatePairAlignments=60;LeftRepeat=L1M4:LINE:L1;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr4 CG SV 180317574 180318145 60 - . ID=1690;Type=tandem-duplication;Left=chr4:180317574-180318145;Right=chr4:180348356-180348908 chr4 CG SV 180348356 180348908 60 - . ID=1690;Type=tandem-duplication;Left=chr4:180317574-180318145;Right=chr4:180348356-180348908 chr4 CG SV 191129525 191129916 11 - . ID=522;Type=interchromosomal;Left=chr4:191129525-191129916-;Right=chr9:67915726-67916093+;Distance=;DiscordantMatePairAlignments=11;LeftRepeat=SVA:Other:Other;Self chain;RightRepeat=LTR53:LTR:ERVL;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr9 CG SV 67915726 67916093 11 - . ID=522;Type=interchromosomal;Left=chr4:191129525-191129916-;Right=chr9:67915726-67916093+;Distance=;DiscordantMatePairAlignments=11;LeftRepeat=SVA:Other:Other;Self chain;RightRepeat=LTR53:LTR:ERVL;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr4 CG SV 191179111 191179707 30 - . ID=1357;Type=interchromosomal;Left=chr4:191179111-191179707-;Right=chr18:102140-102542-;Distance=;DiscordantMatePairAlignments=30;LeftRepeat=SegDup;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr18 CG SV 102140 102542 30 - . ID=1357;Type=interchromosomal;Left=chr4:191179111-191179707-;Right=chr18:102140-102542-;Distance=;DiscordantMatePairAlignments=30;LeftRepeat=SegDup;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr5 CG SV 23049572 23050109 71 - . ID=1279;Type=complex;Left=chr5:23049572-23050109-;Right=chr22:27395551-27396108-;Distance=;DiscordantMatePairAlignments=71;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_001145418:-;XRef=;Frequency=0.00 chr22 CG SV 27395551 27396108 71 - . ID=1279;Type=complex;Left=chr5:23049572-23050109-;Right=chr22:27395551-27396108-;Distance=;DiscordantMatePairAlignments=71;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_001145418:-;XRef=;Frequency=0.00 chr5 CG SV 86718271 86834076 98 . . ID=1678;Type=tandem-duplication;Left=chr5:86718271-86718801-;Right=chr5:86833370-86834076-;Distance=115275;DiscordantMatePairAlignments=98;LeftRepeat=;RightRepeat=;LeftGenes=NM_002890:+;NM_022650:+;RightGenes=;XRef=;Frequency=0.00 chr5 CG SV 86718271 86718801 98 - . ID=1678;Type=tandem-duplication;Left=chr5:86718271-86718801;Right=chr5:86833370-86834076 chr5 CG SV 86833370 86834076 98 - . ID=1678;Type=tandem-duplication;Left=chr5:86718271-86718801;Right=chr5:86833370-86834076 chr5 CG SV 98294024 98309748 92 . . ID=4210;Type=deletion;Left=chr5:98294024-98294546+;Right=chr5:98309135-98309748+;Distance=15111;DiscordantMatePairAlignments=92;LeftRepeat=;RightRepeat=HERV16:LTR:ERVL;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr5 CG SV 98294024 98294546 92 + . ID=4210;Type=deletion;Left=chr5:98294024-98294546;Right=chr5:98309135-98309748 chr5 CG SV 98309135 98309748 92 + . ID=4210;Type=deletion;Left=chr5:98294024-98294546;Right=chr5:98309135-98309748 chr5 CG SV 101108334 101372266 32 . . ID=4208;Type=deletion;Left=chr5:101108334-101108809+;Right=chr5:101371803-101372266+;Distance=263469;DiscordantMatePairAlignments=32;LeftRepeat=L1P4:LINE:L1;Self chain;RightRepeat=L2:LINE:L2;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr5 CG SV 101108334 101108809 32 + . ID=4208;Type=deletion;Left=chr5:101108334-101108809;Right=chr5:101371803-101372266 chr5 CG SV 101371803 101372266 32 + . ID=4208;Type=deletion;Left=chr5:101108334-101108809;Right=chr5:101371803-101372266 chr5 CG SV 120253252 120496341 40 . . ID=4194;Type=deletion;Left=chr5:120253252-120253787+;Right=chr5:120495940-120496341+;Distance=242688;DiscordantMatePairAlignments=40;LeftRepeat=L1P4:LINE:L1;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr5 CG SV 120253252 120253787 40 + . ID=4194;Type=deletion;Left=chr5:120253252-120253787;Right=chr5:120495940-120496341 chr5 CG SV 120495940 120496341 40 + . ID=4194;Type=deletion;Left=chr5:120253252-120253787;Right=chr5:120495940-120496341 chr5 CG SV 121952170 121955872 117 . . ID=4192;Type=deletion;Left=chr5:121952170-121952765+;Right=chr5:121955333-121955872+;Distance=3163;DiscordantMatePairAlignments=117;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr5 CG SV 121952170 121952765 117 + . ID=4192;Type=deletion;Left=chr5:121952170-121952765;Right=chr5:121955333-121955872 chr5 CG SV 121955333 121955872 117 + . ID=4192;Type=deletion;Left=chr5:121952170-121952765;Right=chr5:121955333-121955872 chr5 CG SV 161520501 161521039 68 - . ID=1617;Type=interchromosomal;Left=chr5:161520501-161521039-;Right=chr14:30217336-30217970-;Distance=;DiscordantMatePairAlignments=68;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_016106:+;NM_182835:+;XRef=;Frequency=0.00 chr14 CG SV 30217336 30217970 68 - . ID=1617;Type=interchromosomal;Left=chr5:161520501-161521039-;Right=chr14:30217336-30217970-;Distance=;DiscordantMatePairAlignments=68;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_016106:+;NM_182835:+;XRef=;Frequency=0.00 chr5 CG SV 164931865 165079029 54 . . ID=4162;Type=deletion;Left=chr5:164931865-164932428+;Right=chr5:165078441-165079029+;Distance=146576;DiscordantMatePairAlignments=54;LeftRepeat=MLT1F:LTR:MaLR;RightRepeat=THE1D:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr5 CG SV 164931865 164932428 54 + . ID=4162;Type=deletion;Left=chr5:164931865-164932428;Right=chr5:165078441-165079029 chr5 CG SV 165078441 165079029 54 + . ID=4162;Type=deletion;Left=chr5:164931865-164932428;Right=chr5:165078441-165079029 chr5 CG SV 178041672 178046386 10 . . ID=4141;Type=deletion;Left=chr5:178041672-178042019+;Right=chr5:178046022-178046386+;Distance=4350;DiscordantMatePairAlignments=10;LeftRepeat=AluSg:SINE:Alu;RightRepeat=AluSg:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr5 CG SV 178041672 178042019 10 + . ID=4141;Type=deletion;Left=chr5:178041672-178042019;Right=chr5:178046022-178046386 chr5 CG SV 178046022 178046386 10 + . ID=4141;Type=deletion;Left=chr5:178041672-178042019;Right=chr5:178046022-178046386 chr6 CG SV 44864439 45047295 40 . . ID=1660;Type=tandem-duplication;Left=chr6:44864439-44864888-;Right=chr6:45046617-45047295-;Distance=182407;DiscordantMatePairAlignments=40;LeftRepeat=;RightRepeat=THE1C:LTR:MaLR;LeftGenes=;RightGenes=NM_003599:-;NM_181356:-;XRef=;Frequency=0.00 chr6 CG SV 44864439 44864888 40 - . ID=1660;Type=tandem-duplication;Left=chr6:44864439-44864888;Right=chr6:45046617-45047295 chr6 CG SV 45046617 45047295 40 - . ID=1660;Type=tandem-duplication;Left=chr6:44864439-44864888;Right=chr6:45046617-45047295 chr6 CG SV 57107765 57153828 16 . . ID=4083;Type=complex;Left=chr6:57107765-57108485+;Right=chr6:57153705-57153828+;Distance=45940;DiscordantMatePairAlignments=16;LeftRepeat=;RightRepeat=;LeftGenes=NM_001031623:+;NM_015555:+;RightGenes=NM_004282:+;XRef=;Frequency=0.00 chr6 CG SV 57107765 57108485 16 + . ID=4083;Type=complex;Left=chr6:57107765-57108485;Right=chr6:57153705-57153828 chr6 CG SV 57153705 57153828 16 + . ID=4083;Type=complex;Left=chr6:57107765-57108485;Right=chr6:57153705-57153828 chr6 CG SV 57153519 57162034 35 . . ID=514;Type=complex;Left=chr6:57153519-57153821-;Right=chr6:57161628-57162034+;Distance=7807;DiscordantMatePairAlignments=35;LeftRepeat=L1ME3:LINE:L1;RightRepeat=;LeftGenes=NM_004282:+;RightGenes=NM_016277:-;NM_183227:-;XRef=;Frequency=0.00 chr6 CG SV 57153519 57153821 35 - . ID=514;Type=complex;Left=chr6:57153519-57153821;Right=chr6:57161628-57162034 chr6 CG SV 57161628 57162034 35 - . ID=514;Type=complex;Left=chr6:57153519-57153821;Right=chr6:57161628-57162034 chr6 CG SV 130183997 132245890 74 . . ID=5550;Type=probable-inversion;Left=chr6:130183997-130184560+;Right=chr6:132245493-132245890-;Distance=2061893;DiscordantMatePairAlignments=74;LeftRepeat=L2:LINE:L2;RightRepeat=;LeftGenes=;RightGenes=NM_006208:+;XRef=;Frequency=0.00 chr6 CG SV 130183997 130184560 74 + . ID=5550;Type=probable-inversion;Left=chr6:130183997-130184560;Right=chr6:132245493-132245890 chr6 CG SV 132245493 132245890 74 + . ID=5550;Type=probable-inversion;Left=chr6:130183997-130184560;Right=chr6:132245493-132245890 chr6 CG SV 130330812 132886665 26 . . ID=513;Type=probable-inversion;Left=chr6:130330812-130331483-;Right=chr6:132886312-132886665+;Distance=2554829;DiscordantMatePairAlignments=26;LeftRepeat=;RightRepeat=L1MC3:LINE:L1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr6 CG SV 130330812 130331483 26 - . ID=513;Type=probable-inversion;Left=chr6:130330812-130331483;Right=chr6:132886312-132886665 chr6 CG SV 132886312 132886665 26 - . ID=513;Type=probable-inversion;Left=chr6:130330812-130331483;Right=chr6:132886312-132886665 chr6 CG SV 132250067 132890097 34 . . ID=5548;Type=probable-inversion;Left=chr6:132250067-132250598+;Right=chr6:132889631-132890097-;Distance=640030;DiscordantMatePairAlignments=34;LeftRepeat=Self chain;RightRepeat=MER57A-int:LTR:ERV1;LeftGenes=NM_006208:+;RightGenes=;XRef=;Frequency=0.00 chr6 CG SV 132250067 132250598 34 + . ID=5548;Type=probable-inversion;Left=chr6:132250067-132250598;Right=chr6:132889631-132890097 chr6 CG SV 132889631 132890097 34 + . ID=5548;Type=probable-inversion;Left=chr6:132250067-132250598;Right=chr6:132889631-132890097 chr6 CG SV 148756344 148772706 64 . . ID=511;Type=probable-inversion;Left=chr6:148756344-148756898-;Right=chr6:148772214-148772706+;Distance=15316;DiscordantMatePairAlignments=64;LeftRepeat=AluSq:SINE:Alu;RightRepeat=;LeftGenes=NM_015278:+;RightGenes=NM_015278:+;XRef=;Frequency=0.00 chr6 CG SV 148756344 148756898 64 - . ID=511;Type=probable-inversion;Left=chr6:148756344-148756898;Right=chr6:148772214-148772706 chr6 CG SV 148772214 148772706 64 - . ID=511;Type=probable-inversion;Left=chr6:148756344-148756898;Right=chr6:148772214-148772706 chr6 CG SV 152563955 152580615 72 . . ID=1645;Type=tandem-duplication;Left=chr6:152563955-152564421-;Right=chr6:152580230-152580615-;Distance=16194;DiscordantMatePairAlignments=72;LeftRepeat=;RightRepeat=;LeftGenes=NM_015293:-;NM_033071:-;NM_182961:-;RightGenes=NM_015293:-;NM_033071:-;NM_182961:-;XRef=;Frequency=0.00 chr6 CG SV 152563955 152564421 72 - . ID=1645;Type=tandem-duplication;Left=chr6:152563955-152564421;Right=chr6:152580230-152580615 chr6 CG SV 152580230 152580615 72 - . ID=1645;Type=tandem-duplication;Left=chr6:152563955-152564421;Right=chr6:152580230-152580615 chr6 CG SV 162410104 162686511 43 . . ID=4014;Type=deletion;Left=chr6:162410104-162410472+;Right=chr6:162685824-162686511+;Distance=275720;DiscordantMatePairAlignments=43;LeftRepeat=Self chain;THE1A:LTR:MaLR;RightRepeat=;LeftGenes=NM_004562:-;NM_013987:-;NM_013988:-;RightGenes=NM_004562:-;NM_013987:-;NM_013988:-;XRef=;Frequency=0.00 chr6 CG SV 162410104 162410472 43 + . ID=4014;Type=deletion;Left=chr6:162410104-162410472;Right=chr6:162685824-162686511 chr6 CG SV 162685824 162686511 43 + . ID=4014;Type=deletion;Left=chr6:162410104-162410472;Right=chr6:162685824-162686511 chr6 CG SV 162859718 162932994 10 . . ID=4011;Type=deletion;Left=chr6:162859718-162860195+;Right=chr6:162932556-162932994+;Distance=72838;DiscordantMatePairAlignments=10;LeftRepeat=;RightRepeat=;LeftGenes=NM_004562:-;NM_013987:-;NM_013988:-;RightGenes=NM_004562:-;NM_013987:-;NM_013988:-;XRef=;Frequency=0.00 chr6 CG SV 162859718 162860195 10 + . ID=4011;Type=deletion;Left=chr6:162859718-162860195;Right=chr6:162932556-162932994 chr6 CG SV 162932556 162932994 10 + . ID=4011;Type=deletion;Left=chr6:162859718-162860195;Right=chr6:162932556-162932994 chr6 CG SV 167729750 167737155 148 . . ID=509;Type=probable-inversion;Left=chr6:167729750-167730551-;Right=chr6:167736636-167737155+;Distance=6085;DiscordantMatePairAlignments=148;LeftRepeat=L1MC3:LINE:L1;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr6 CG SV 167729750 167730551 148 - . ID=509;Type=probable-inversion;Left=chr6:167729750-167730551;Right=chr6:167736636-167737155 chr6 CG SV 167736636 167737155 148 - . ID=509;Type=probable-inversion;Left=chr6:167729750-167730551;Right=chr6:167736636-167737155 chr6 CG SV 167738310 167738940 114 + . ID=3925;Type=interchromosomal;Left=chr6:167738310-167738940+;Right=chr13:86917347-86917863+;Distance=;DiscordantMatePairAlignments=114;LeftRepeat=Self chain;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr13 CG SV 86917347 86917863 114 + . ID=3925;Type=interchromosomal;Left=chr6:167738310-167738940+;Right=chr13:86917347-86917863+;Distance=;DiscordantMatePairAlignments=114;LeftRepeat=Self chain;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr6 CG SV 168101456 168262571 158 . . ID=5546;Type=probable-inversion;Left=chr6:168101456-168102061+;Right=chr6:168261897-168262571-;Distance=161115;DiscordantMatePairAlignments=158;LeftRepeat=;RightRepeat=Self chain;LeftGenes=NM_001040000:+;NM_001040001:+;RightGenes=;XRef=;Frequency=0.00 chr6 CG SV 168101456 168102061 158 + . ID=5546;Type=probable-inversion;Left=chr6:168101456-168102061;Right=chr6:168261897-168262571 chr6 CG SV 168261897 168262571 158 + . ID=5546;Type=probable-inversion;Left=chr6:168101456-168102061;Right=chr6:168261897-168262571 chr7 CG SV 948622 950389 34 . . ID=3998;Type=deletion;Left=chr7:948622-949164+;Right=chr7:950039-950389+;Distance=1417;DiscordantMatePairAlignments=34;LeftRepeat=GA-rich:Low_complexity:Low_complexity;Self chain;Tandem GAG;Tandem period 18;RightRepeat=GA-rich:Low_complexity:Low_complexity;Self chain;Tandem period 18;LeftGenes=NM_006869:-;RightGenes=NM_006869:-;XRef=;Frequency=0.00 chr7 CG SV 948622 949164 34 + . ID=3998;Type=deletion;Left=chr7:948622-949164;Right=chr7:950039-950389 chr7 CG SV 950039 950389 34 + . ID=3998;Type=deletion;Left=chr7:948622-949164;Right=chr7:950039-950389 chr7 CG SV 3101894 3105192 15 . . ID=3991;Type=deletion;Left=chr7:3101894-3102385+;Right=chr7:3104755-3105192+;Distance=2861;DiscordantMatePairAlignments=15;LeftRepeat=AluSq/x:SINE:Alu;RightRepeat=AluSq:SINE:Alu;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr7 CG SV 3101894 3102385 15 + . ID=3991;Type=deletion;Left=chr7:3101894-3102385;Right=chr7:3104755-3105192 chr7 CG SV 3104755 3105192 15 + . ID=3991;Type=deletion;Left=chr7:3101894-3102385;Right=chr7:3104755-3105192 chr7 CG SV 110113967 110114556 37 + . ID=5302;Type=complex;Left=chr7:110113967-110114556+;Right=chr22:27395292-27395889-;Distance=;DiscordantMatePairAlignments=37;LeftRepeat=L2:LINE:L2;RightRepeat=;LeftGenes=NM_032549:-;RightGenes=NM_001145418:-;XRef=;Frequency=0.00 chr22 CG SV 27395292 27395889 37 + . ID=5302;Type=complex;Left=chr7:110113967-110114556+;Right=chr22:27395292-27395889-;Distance=;DiscordantMatePairAlignments=37;LeftRepeat=L2:LINE:L2;RightRepeat=;LeftGenes=NM_032549:-;RightGenes=NM_001145418:-;XRef=;Frequency=0.00 chr7 CG SV 133132212 133143312 24 . . ID=1599;Type=tandem-duplication;Left=chr7:133132212-133132748-;Right=chr7:133142966-133143312-;Distance=10564;DiscordantMatePairAlignments=24;LeftRepeat=;RightRepeat=;LeftGenes=NM_021807:+;RightGenes=NM_021807:+;XRef=;Frequency=0.00 chr7 CG SV 133132212 133132748 24 - . ID=1599;Type=tandem-duplication;Left=chr7:133132212-133132748;Right=chr7:133142966-133143312 chr7 CG SV 133142966 133143312 24 - . ID=1599;Type=tandem-duplication;Left=chr7:133132212-133132748;Right=chr7:133142966-133143312 chr7 CG SV 133519711 133520247 53 - . ID=306;Type=interchromosomal;Left=chr7:133519711-133520247-;Right=chr18:25580290-25580784+;Distance=;DiscordantMatePairAlignments=53;LeftRepeat=;RightRepeat=;LeftGenes=NM_144648:+;RightGenes=;XRef=;Frequency=0.00 chr18 CG SV 25580290 25580784 53 - . ID=306;Type=interchromosomal;Left=chr7:133519711-133520247-;Right=chr18:25580290-25580784+;Distance=;DiscordantMatePairAlignments=53;LeftRepeat=;RightRepeat=;LeftGenes=NM_144648:+;RightGenes=;XRef=;Frequency=0.00 chr7 CG SV 140066224 140255672 91 . . ID=3885;Type=deletion;Left=chr7:140066224-140066780+;Right=chr7:140255041-140255672+;Distance=188817;DiscordantMatePairAlignments=91;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=NM_004333:-;XRef=;Frequency=0.00 chr7 CG SV 140066224 140066780 91 + . ID=3885;Type=deletion;Left=chr7:140066224-140066780;Right=chr7:140255041-140255672 chr7 CG SV 140255041 140255672 91 + . ID=3885;Type=deletion;Left=chr7:140066224-140066780;Right=chr7:140255041-140255672 chr7 CG SV 144703513 144709224 49 . . ID=3878;Type=deletion;Left=chr7:144703513-144704099+;Right=chr7:144708635-144709224+;Distance=5122;DiscordantMatePairAlignments=49;LeftRepeat=L1MD2:LINE:L1;RightRepeat=THE1D:LTR:MaLR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr7 CG SV 144703513 144704099 49 + . ID=3878;Type=deletion;Left=chr7:144703513-144704099;Right=chr7:144708635-144709224 chr7 CG SV 144708635 144709224 49 + . ID=3878;Type=deletion;Left=chr7:144703513-144704099;Right=chr7:144708635-144709224 chr7 CG SV 151795880 151796820 28 . . ID=3872;Type=deletion;Left=chr7:151795880-151796373+;Right=chr7:151796549-151796820+;Distance=669;DiscordantMatePairAlignments=28;LeftRepeat=Self chain;RightRepeat=AluSc:SINE:Alu;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr7 CG SV 151795880 151796373 28 + . ID=3872;Type=deletion;Left=chr7:151795880-151796373;Right=chr7:151796549-151796820 chr7 CG SV 151796549 151796820 28 + . ID=3872;Type=deletion;Left=chr7:151795880-151796373;Right=chr7:151796549-151796820 chr7 CG SV 156789004 156790068 16 . . ID=3859;Type=deletion;Left=chr7:156789004-156789775+;Right=chr7:156789828-156790068+;Distance=824;DiscordantMatePairAlignments=16;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr7 CG SV 156789004 156789775 16 + . ID=3859;Type=deletion;Left=chr7:156789004-156789775;Right=chr7:156789828-156790068 chr7 CG SV 156789828 156790068 16 + . ID=3859;Type=deletion;Left=chr7:156789004-156789775;Right=chr7:156789828-156790068 chr8 CG SV 8764151 8766691 57 . . ID=3833;Type=deletion;Left=chr8:8764151-8764824+;Right=chr8:8766092-8766691+;Distance=1941;DiscordantMatePairAlignments=57;LeftRepeat=Self chain;RightRepeat=MIRb:SINE:MIR;Self chain;LeftGenes=NM_004225:-;RightGenes=NM_004225:-;XRef=;Frequency=0.00 chr8 CG SV 8764151 8764824 57 + . ID=3833;Type=deletion;Left=chr8:8764151-8764824;Right=chr8:8766092-8766691 chr8 CG SV 8766092 8766691 57 + . ID=3833;Type=deletion;Left=chr8:8764151-8764824;Right=chr8:8766092-8766691 chr8 CG SV 36078419 36081845 44 . . ID=465;Type=complex;Left=chr8:36078419-36078973-;Right=chr8:36081402-36081845+;Distance=2429;DiscordantMatePairAlignments=44;LeftRepeat=AluJo:SINE:Alu;RightRepeat=L1MC1:LINE:L1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr8 CG SV 36078419 36078973 44 - . ID=465;Type=complex;Left=chr8:36078419-36078973;Right=chr8:36081402-36081845 chr8 CG SV 36081402 36081845 44 - . ID=465;Type=complex;Left=chr8:36078419-36078973;Right=chr8:36081402-36081845 chr8 CG SV 36080521 36081914 57 . . ID=3818;Type=complex;Left=chr8:36080521-36081104+;Right=chr8:36081402-36081914+;Distance=881;DiscordantMatePairAlignments=57;LeftRepeat=;RightRepeat=L1MC1:LINE:L1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr8 CG SV 36080521 36081104 57 + . ID=3818;Type=complex;Left=chr8:36080521-36081104;Right=chr8:36081402-36081914 chr8 CG SV 36081402 36081914 57 + . ID=3818;Type=complex;Left=chr8:36080521-36081104;Right=chr8:36081402-36081914 chr8 CG SV 36141670 36142192 17 + . ID=2895;Type=interchromosomal;Left=chr8:36141670-36142192+;Right=chrX:69663172-69664040+;Distance=;DiscordantMatePairAlignments=17;LeftRepeat=AluSx:SINE:Alu;Tandem A;RightRepeat=L1MC4:LINE:L1;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chrX CG SV 69663172 69664040 17 + . ID=2895;Type=interchromosomal;Left=chr8:36141670-36142192+;Right=chrX:69663172-69664040+;Distance=;DiscordantMatePairAlignments=17;LeftRepeat=AluSx:SINE:Alu;Tandem A;RightRepeat=L1MC4:LINE:L1;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr8 CG SV 124426774 124524454 22 . . ID=3766;Type=deletion;Left=chr8:124426774-124427283+;Right=chr8:124524002-124524454+;Distance=97228;DiscordantMatePairAlignments=22;LeftRepeat=AT_rich:Low_complexity:Low_complexity;RightRepeat=AluSg:SINE:Alu;LeftGenes=NM_014109:-;RightGenes=;XRef=;Frequency=0.00 chr8 CG SV 124426774 124427283 22 + . ID=3766;Type=deletion;Left=chr8:124426774-124427283;Right=chr8:124524002-124524454 chr8 CG SV 124524002 124524454 22 + . ID=3766;Type=deletion;Left=chr8:124426774-124427283;Right=chr8:124524002-124524454 chr9 CG SV 18064328 18069057 85 . . ID=451;Type=probable-inversion;Left=chr9:18064328-18065011-;Right=chr9:18068296-18069057+;Distance=3285;DiscordantMatePairAlignments=85;LeftRepeat=CT-rich:Low_complexity:Low_complexity;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr9 CG SV 18064328 18065011 85 - . ID=451;Type=probable-inversion;Left=chr9:18064328-18065011;Right=chr9:18068296-18069057 chr9 CG SV 18068296 18069057 85 - . ID=451;Type=probable-inversion;Left=chr9:18064328-18065011;Right=chr9:18068296-18069057 chr9 CG SV 28432994 28571192 50 . . ID=3725;Type=deletion;Left=chr9:28432994-28433502+;Right=chr9:28570679-28571192+;Distance=137685;DiscordantMatePairAlignments=50;LeftRepeat=;RightRepeat=;LeftGenes=NM_152570:-;RightGenes=NM_152570:-;XRef=;Frequency=0.00 chr9 CG SV 28432994 28433502 50 + . ID=3725;Type=deletion;Left=chr9:28432994-28433502;Right=chr9:28570679-28571192 chr9 CG SV 28570679 28571192 50 + . ID=3725;Type=deletion;Left=chr9:28432994-28433502;Right=chr9:28570679-28571192 chr9 CG SV 80972444 80973666 159 . . ID=441;Type=probable-inversion;Left=chr9:80972444-80972830-;Right=chr9:80973151-80973666+;Distance=321;DiscordantMatePairAlignments=159;LeftRepeat=MLT1K:LTR:MaLR;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr9 CG SV 80972444 80972830 159 - . ID=441;Type=probable-inversion;Left=chr9:80972444-80972830;Right=chr9:80973151-80973666 chr9 CG SV 80973151 80973666 159 - . ID=441;Type=probable-inversion;Left=chr9:80972444-80972830;Right=chr9:80973151-80973666 chr9 CG SV 81951198 81951826 271 - . ID=1426;Type=interchromosomal;Left=chr9:81951198-81951826-;Right=chr13:61645090-61645677-;Distance=;DiscordantMatePairAlignments=271;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr13 CG SV 61645090 61645677 271 - . ID=1426;Type=interchromosomal;Left=chr9:81951198-81951826-;Right=chr13:61645090-61645677-;Distance=;DiscordantMatePairAlignments=271;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr9 CG SV 128256355 128458328 93 . . ID=3662;Type=deletion;Left=chr9:128256355-128256950+;Right=chr9:128457801-128458328+;Distance=201446;DiscordantMatePairAlignments=93;LeftRepeat=;RightRepeat=Self chain;LeftGenes=NM_033446:+;RightGenes=NM_002316:+;XRef=;Frequency=0.00 chr9 CG SV 128256355 128256950 93 + . ID=3662;Type=deletion;Left=chr9:128256355-128256950;Right=chr9:128457801-128458328 chr9 CG SV 128457801 128458328 93 + . ID=3662;Type=deletion;Left=chr9:128256355-128256950;Right=chr9:128457801-128458328 chr9 CG SV 140032250 140034056 20 . . ID=3633;Type=deletion;Left=chr9:140032250-140032691+;Right=chr9:140033878-140034056+;Distance=1628;DiscordantMatePairAlignments=20;LeftRepeat=Self chain;Tandem period 37;RightRepeat=Self chain;LeftGenes=NM_000718:+;RightGenes=NM_000718:+;XRef=;Frequency=0.06 chr9 CG SV 140032250 140032691 20 + . ID=3633;Type=deletion;Left=chr9:140032250-140032691;Right=chr9:140033878-140034056 chr9 CG SV 140033878 140034056 20 + . ID=3633;Type=deletion;Left=chr9:140032250-140032691;Right=chr9:140033878-140034056 chr9 CG SV 140138980 140153873 12 . . ID=3632;Type=deletion;Left=chr9:140138980-140139099+;Right=chr9:140153504-140153873+;Distance=14524;DiscordantMatePairAlignments=12;LeftRepeat=(TTG)n:Simple_repeat:Simple_repeat;Self chain;Tandem TTG;RightRepeat=SegDup;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr9 CG SV 140138980 140139099 12 + . ID=3632;Type=deletion;Left=chr9:140138980-140139099;Right=chr9:140153504-140153873 chr9 CG SV 140153504 140153873 12 + . ID=3632;Type=deletion;Left=chr9:140138980-140139099;Right=chr9:140153504-140153873 chr10 CG SV 52595633 52992546 27 . . ID=3575;Type=deletion;Left=chr10:52595633-52595786+;Right=chr10:52992070-52992546+;Distance=396437;DiscordantMatePairAlignments=27;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_001098512:+;NM_006258:+;RightGenes=NM_001098512:+;NM_006258:+;XRef=;Frequency=0.00 chr10 CG SV 52595633 52595786 27 + . ID=3575;Type=deletion;Left=chr10:52595633-52595786;Right=chr10:52992070-52992546 chr10 CG SV 52992070 52992546 27 + . ID=3575;Type=deletion;Left=chr10:52595633-52595786;Right=chr10:52992070-52992546 chr10 CG SV 56356483 56381678 37 . . ID=3572;Type=deletion;Left=chr10:56356483-56356965+;Right=chr10:56381113-56381678+;Distance=24630;DiscordantMatePairAlignments=37;LeftRepeat=L1PA13:LINE:L1;Self chain;RightRepeat=L1MC2:LINE:L1;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr10 CG SV 56356483 56356965 37 + . ID=3572;Type=deletion;Left=chr10:56356483-56356965;Right=chr10:56381113-56381678 chr10 CG SV 56381113 56381678 37 + . ID=3572;Type=deletion;Left=chr10:56356483-56356965;Right=chr10:56381113-56381678 chr10 CG SV 56423945 56604143 40 . . ID=3571;Type=deletion;Left=chr10:56423945-56424452+;Right=chr10:56603586-56604143+;Distance=179641;DiscordantMatePairAlignments=40;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr10 CG SV 56423945 56424452 40 + . ID=3571;Type=deletion;Left=chr10:56423945-56424452;Right=chr10:56603586-56604143 chr10 CG SV 56603586 56604143 40 + . ID=3571;Type=deletion;Left=chr10:56423945-56424452;Right=chr10:56603586-56604143 chr11 CG SV 19708432 19714847 107 . . ID=3481;Type=deletion;Left=chr11:19708432-19709016+;Right=chr11:19714181-19714847+;Distance=5749;DiscordantMatePairAlignments=107;LeftRepeat=;RightRepeat=;LeftGenes=NM_001111018:+;NM_145117:+;NM_182964:+;RightGenes=NM_001111018:+;NM_145117:+;NM_182964:+;XRef=;Frequency=0.00 chr11 CG SV 19708432 19709016 107 + . ID=3481;Type=deletion;Left=chr11:19708432-19709016;Right=chr11:19714181-19714847 chr11 CG SV 19714181 19714847 107 + . ID=3481;Type=deletion;Left=chr11:19708432-19709016;Right=chr11:19714181-19714847 chr11 CG SV 37678950 37695111 68 . . ID=1471;Type=tandem-duplication;Left=chr11:37678950-37679545-;Right=chr11:37694492-37695111-;Distance=15566;DiscordantMatePairAlignments=68;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr11 CG SV 37678950 37679545 68 - . ID=1471;Type=tandem-duplication;Left=chr11:37678950-37679545;Right=chr11:37694492-37695111 chr11 CG SV 37694492 37695111 68 - . ID=1471;Type=tandem-duplication;Left=chr11:37678950-37679545;Right=chr11:37694492-37695111 chr11 CG SV 84193894 84260494 61 . . ID=3413;Type=deletion;Left=chr11:84193894-84194462+;Right=chr11:84260053-84260494+;Distance=66159;DiscordantMatePairAlignments=61;LeftRepeat=L1MD1:LINE:L1;Self chain;RightRepeat=Self chain;LeftGenes=NM_001142699:-;NM_001364:-;RightGenes=NM_001142699:-;NM_001364:-;XRef=;Frequency=0.00 chr11 CG SV 84193894 84194462 61 + . ID=3413;Type=deletion;Left=chr11:84193894-84194462;Right=chr11:84260053-84260494 chr11 CG SV 84260053 84260494 61 + . ID=3413;Type=deletion;Left=chr11:84193894-84194462;Right=chr11:84260053-84260494 chr12 CG SV 6718238 6719205 13 . . ID=3369;Type=deletion;Left=chr12:6718238-6718794+;Right=chr12:6718881-6719205+;Distance=643;DiscordantMatePairAlignments=13;LeftRepeat=AluSc:SINE:Alu;Tandem period 134;RightRepeat=AluY:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr12 CG SV 6718238 6718794 13 + . ID=3369;Type=deletion;Left=chr12:6718238-6718794;Right=chr12:6718881-6719205 chr12 CG SV 6718881 6719205 13 + . ID=3369;Type=deletion;Left=chr12:6718238-6718794;Right=chr12:6718881-6719205 chr12 CG SV 17507658 17509480 59 . . ID=3359;Type=deletion;Left=chr12:17507658-17508071+;Right=chr12:17508880-17509480+;Distance=1222;DiscordantMatePairAlignments=59;LeftRepeat=;RightRepeat=AluY:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr12 CG SV 17507658 17508071 59 + . ID=3359;Type=deletion;Left=chr12:17507658-17508071;Right=chr12:17508880-17509480 chr12 CG SV 17508880 17509480 59 + . ID=3359;Type=deletion;Left=chr12:17507658-17508071;Right=chr12:17508880-17509480 chr12 CG SV 66617867 66620972 100 . . ID=1436;Type=tandem-duplication;Left=chr12:66617867-66618500-;Right=chr12:66620410-66620972-;Distance=2472;DiscordantMatePairAlignments=100;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr12 CG SV 66617867 66618500 100 - . ID=1436;Type=tandem-duplication;Left=chr12:66617867-66618500;Right=chr12:66620410-66620972 chr12 CG SV 66620410 66620972 100 - . ID=1436;Type=tandem-duplication;Left=chr12:66617867-66618500;Right=chr12:66620410-66620972 chr12 CG SV 76478897 76508897 65 . . ID=1435;Type=tandem-duplication;Left=chr12:76478897-76479343-;Right=chr12:76508372-76508897-;Distance=29554;DiscordantMatePairAlignments=65;LeftRepeat=L1M:LINE:L1;RightRepeat=MIRb:SINE:MIR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr12 CG SV 76478897 76479343 65 - . ID=1435;Type=tandem-duplication;Left=chr12:76478897-76479343;Right=chr12:76508372-76508897 chr12 CG SV 76508372 76508897 65 - . ID=1435;Type=tandem-duplication;Left=chr12:76478897-76479343;Right=chr12:76508372-76508897 chr12 CG SV 99859423 99859912 31 + . ID=5156;Type=complex;Left=chr12:99859423-99859912+;Right=chr22:27395476-27395889-;Distance=;DiscordantMatePairAlignments=31;LeftRepeat=L1ME3B:LINE:L1;RightRepeat=;LeftGenes=NM_178826:+;RightGenes=NM_001145418:-;XRef=;Frequency=0.00 chr22 CG SV 27395476 27395889 31 + . ID=5156;Type=complex;Left=chr12:99859423-99859912+;Right=chr22:27395476-27395889-;Distance=;DiscordantMatePairAlignments=31;LeftRepeat=L1ME3B:LINE:L1;RightRepeat=;LeftGenes=NM_178826:+;RightGenes=NM_001145418:-;XRef=;Frequency=0.00 chr12 CG SV 123675231 123904486 62 . . ID=1416;Type=tandem-duplication;Left=chr12:123675231-123675891-;Right=chr12:123904189-123904486-;Distance=228595;DiscordantMatePairAlignments=62;LeftRepeat=AluJo:SINE:Alu;RightRepeat=L2:LINE:L2;LeftGenes=;RightGenes=NM_001082959:-;NM_005505:-;XRef=;Frequency=0.00 chr12 CG SV 123675231 123675891 62 - . ID=1416;Type=tandem-duplication;Left=chr12:123675231-123675891;Right=chr12:123904189-123904486 chr12 CG SV 123904189 123904486 62 - . ID=1416;Type=tandem-duplication;Left=chr12:123675231-123675891;Right=chr12:123904189-123904486 chr13 CG SV 23620946 23645481 89 . . ID=3264;Type=deletion;Left=chr13:23620946-23621563+;Right=chr13:23644955-23645481+;Distance=24009;DiscordantMatePairAlignments=89;LeftRepeat=Self chain;RightRepeat=L1MD1:LINE:L1;Self chain;LeftGenes=;RightGenes=NM_001166271:+;NM_153023:+;XRef=;Frequency=0.00 chr13 CG SV 23620946 23621563 89 + . ID=3264;Type=deletion;Left=chr13:23620946-23621563;Right=chr13:23644955-23645481 chr13 CG SV 23644955 23645481 89 + . ID=3264;Type=deletion;Left=chr13:23620946-23621563;Right=chr13:23644955-23645481 chr13 CG SV 25170862 25172758 72 . . ID=3262;Type=deletion;Left=chr13:25170862-25171541+;Right=chr13:25172085-25172758+;Distance=1223;DiscordantMatePairAlignments=72;LeftRepeat=;RightRepeat=;LeftGenes=NM_016529:+;RightGenes=NM_016529:+;XRef=;Frequency=0.00 chr13 CG SV 25170862 25171541 72 + . ID=3262;Type=deletion;Left=chr13:25170862-25171541;Right=chr13:25172085-25172758 chr13 CG SV 25172085 25172758 72 + . ID=3262;Type=deletion;Left=chr13:25170862-25171541;Right=chr13:25172085-25172758 chr13 CG SV 30094958 30096252 82 . . ID=3252;Type=deletion;Left=chr13:30094958-30095622+;Right=chr13:30095770-30096252+;Distance=812;DiscordantMatePairAlignments=82;LeftRepeat=;RightRepeat=MER21B:LTR:ERV1;LeftGenes=NM_005800:+;RightGenes=NM_005800:+;XRef=;Frequency=0.00 chr13 CG SV 30094958 30095622 82 + . ID=3252;Type=deletion;Left=chr13:30094958-30095622;Right=chr13:30095770-30096252 chr13 CG SV 30095770 30096252 82 + . ID=3252;Type=deletion;Left=chr13:30094958-30095622;Right=chr13:30095770-30096252 chr13 CG SV 61213446 61221118 323 . . ID=372;Type=probable-inversion;Left=chr13:61213446-61214041-;Right=chr13:61220487-61221118+;Distance=6446;DiscordantMatePairAlignments=323;LeftRepeat=L2:LINE:L2;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr13 CG SV 61213446 61214041 323 - . ID=372;Type=probable-inversion;Left=chr13:61213446-61214041;Right=chr13:61220487-61221118 chr13 CG SV 61220487 61221118 323 - . ID=372;Type=probable-inversion;Left=chr13:61213446-61214041;Right=chr13:61220487-61221118 chr13 CG SV 62847334 62847983 11 - . ID=161;Type=interchromosomal;Left=chr13:62847334-62847983-;Right=chr19:18924852-18925146+;Distance=;DiscordantMatePairAlignments=11;LeftRepeat=AluJb:SINE:Alu;RightRepeat=AluSx:SINE:Alu;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr19 CG SV 18924852 18925146 11 - . ID=161;Type=interchromosomal;Left=chr13:62847334-62847983-;Right=chr19:18924852-18925146+;Distance=;DiscordantMatePairAlignments=11;LeftRepeat=AluJb:SINE:Alu;RightRepeat=AluSx:SINE:Alu;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr13 CG SV 67887094 67887752 153 + . ID=5243;Type=interchromosomal;Left=chr13:67887094-67887752+;Right=chr18:36916261-36916953-;Distance=;DiscordantMatePairAlignments=153;LeftRepeat=AluSx:SINE:Alu;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr18 CG SV 36916261 36916953 153 + . ID=5243;Type=interchromosomal;Left=chr13:67887094-67887752+;Right=chr18:36916261-36916953-;Distance=;DiscordantMatePairAlignments=153;LeftRepeat=AluSx:SINE:Alu;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr13 CG SV 73503518 73506266 57 . . ID=3218;Type=deletion;Left=chr13:73503518-73504103+;Right=chr13:73505572-73506266+;Distance=2054;DiscordantMatePairAlignments=57;LeftRepeat=;RightRepeat=MIRb:SINE:MIR;LeftGenes=NM_007249:-;RightGenes=NM_007249:-;XRef=;Frequency=0.00 chr13 CG SV 73503518 73504103 57 + . ID=3218;Type=deletion;Left=chr13:73503518-73504103;Right=chr13:73505572-73506266 chr13 CG SV 73505572 73506266 57 + . ID=3218;Type=deletion;Left=chr13:73503518-73504103;Right=chr13:73505572-73506266 chr13 CG SV 91740904 92563894 34 . . ID=3209;Type=deletion;Left=chr13:91740904-91741351+;Right=chr13:92563358-92563894+;Distance=822454;DiscordantMatePairAlignments=34;LeftRepeat=L1PB1:LINE:L1;RightRepeat=;LeftGenes=NM_004466:+;RightGenes=;XRef=;Frequency=0.00 chr13 CG SV 91740904 91741351 34 + . ID=3209;Type=deletion;Left=chr13:91740904-91741351;Right=chr13:92563358-92563894 chr13 CG SV 92563358 92563894 34 + . ID=3209;Type=deletion;Left=chr13:91740904-91741351;Right=chr13:92563358-92563894 chr13 CG SV 92724372 92781859 13 . . ID=3208;Type=complex;Left=chr13:92724372-92724813+;Right=chr13:92781542-92781859+;Distance=57170;DiscordantMatePairAlignments=13;LeftRepeat=;RightRepeat=;LeftGenes=NM_005708:+;RightGenes=NM_005708:+;XRef=;Frequency=0.00 chr13 CG SV 92724372 92724813 13 + . ID=3208;Type=complex;Left=chr13:92724372-92724813;Right=chr13:92781542-92781859 chr13 CG SV 92781542 92781859 13 + . ID=3208;Type=complex;Left=chr13:92724372-92724813;Right=chr13:92781542-92781859 chr13 CG SV 92780284 92782111 12 . . ID=369;Type=complex;Left=chr13:92780284-92780393-;Right=chr13:92781545-92782111+;Distance=1152;DiscordantMatePairAlignments=12;LeftRepeat=MER20B:DNA:MER1_type;RightRepeat=;LeftGenes=NM_005708:+;RightGenes=NM_005708:+;XRef=;Frequency=0.00 chr13 CG SV 92780284 92780393 12 - . ID=369;Type=complex;Left=chr13:92780284-92780393;Right=chr13:92781545-92782111 chr13 CG SV 92781545 92782111 12 - . ID=369;Type=complex;Left=chr13:92780284-92780393;Right=chr13:92781545-92782111 chr13 CG SV 93255345 93632370 83 . . ID=3207;Type=deletion;Left=chr13:93255345-93255916+;Right=chr13:93631737-93632370+;Distance=376392;DiscordantMatePairAlignments=83;LeftRepeat=;RightRepeat=MIR3:SINE:MIR;LeftGenes=NM_005708:+;RightGenes=NM_005708:+;XRef=;Frequency=0.00 chr13 CG SV 93255345 93255916 83 + . ID=3207;Type=deletion;Left=chr13:93255345-93255916;Right=chr13:93631737-93632370 chr13 CG SV 93631737 93632370 83 + . ID=3207;Type=deletion;Left=chr13:93255345-93255916;Right=chr13:93631737-93632370 chr13 CG SV 94244887 94286246 145 . . ID=5416;Type=probable-inversion;Left=chr13:94244887-94245613+;Right=chr13:94285549-94286246-;Distance=41359;DiscordantMatePairAlignments=145;LeftRepeat=;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr13 CG SV 94244887 94245613 145 + . ID=5416;Type=probable-inversion;Left=chr13:94244887-94245613;Right=chr13:94285549-94286246 chr13 CG SV 94285549 94286246 145 + . ID=5416;Type=probable-inversion;Left=chr13:94244887-94245613;Right=chr13:94285549-94286246 chr14 CG SV 60669760 60675695 10 . . ID=3156;Type=deletion;Left=chr14:60669760-60670267+;Right=chr14:60675276-60675695+;Distance=5516;DiscordantMatePairAlignments=10;LeftRepeat=LTR7:LTR:ERV1;RightRepeat=LTR7:LTR:ERV1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr14 CG SV 60669760 60670267 10 + . ID=3156;Type=deletion;Left=chr14:60669760-60670267;Right=chr14:60675276-60675695 chr14 CG SV 60675276 60675695 10 + . ID=3156;Type=deletion;Left=chr14:60669760-60670267;Right=chr14:60675276-60675695 chr14 CG SV 66909183 66950565 51 . . ID=3154;Type=deletion;Left=chr14:66909183-66909749+;Right=chr14:66950119-66950565+;Distance=40936;DiscordantMatePairAlignments=51;LeftRepeat=AluSc:SINE:Alu;RightRepeat=;LeftGenes=NM_004094:+;RightGenes=;XRef=;Frequency=0.00 chr14 CG SV 66909183 66909749 51 + . ID=3154;Type=deletion;Left=chr14:66909183-66909749;Right=chr14:66950119-66950565 chr14 CG SV 66950119 66950565 51 + . ID=3154;Type=deletion;Left=chr14:66909183-66909749;Right=chr14:66950119-66950565 chr14 CG SV 86617154 86629211 86 . . ID=1392;Type=tandem-duplication;Left=chr14:86617154-86617680-;Right=chr14:86628588-86629211-;Distance=11531;DiscordantMatePairAlignments=86;LeftRepeat=;RightRepeat=MIR:SINE:MIR;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr14 CG SV 86617154 86617680 86 - . ID=1392;Type=tandem-duplication;Left=chr14:86617154-86617680;Right=chr14:86628588-86629211 chr14 CG SV 86628588 86629211 86 - . ID=1392;Type=tandem-duplication;Left=chr14:86617154-86617680;Right=chr14:86628588-86629211 chr15 CG SV 22884280 22885831 14 . . ID=3109;Type=deletion;Left=chr15:22884280-22884803+;Right=chr15:22885422-22885831+;Distance=1142;DiscordantMatePairAlignments=14;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.06 chr15 CG SV 22884280 22884803 14 + . ID=3109;Type=deletion;Left=chr15:22884280-22884803;Right=chr15:22885422-22885831 chr15 CG SV 22885422 22885831 14 + . ID=3109;Type=deletion;Left=chr15:22884280-22884803;Right=chr15:22885422-22885831 chr16 CG SV 1972851 2013696 37 . . ID=3032;Type=deletion;Left=chr16:1972851-1973536+;Right=chr16:2013149-2013696+;Distance=40298;DiscordantMatePairAlignments=37;LeftRepeat=AluJo:SINE:Alu;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr16 CG SV 1972851 1973536 37 + . ID=3032;Type=deletion;Left=chr16:1972851-1973536;Right=chr16:2013149-2013696 chr16 CG SV 2013149 2013696 37 + . ID=3032;Type=deletion;Left=chr16:1972851-1973536;Right=chr16:2013149-2013696 chr16 CG SV 68281808 68282978 53 . . ID=1174;Type=tandem-duplication;Left=chr16:68281808-68282304-;Right=chr16:68282435-68282978-;Distance=674;DiscordantMatePairAlignments=53;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_001113178:+;NM_006599:+;NM_138713:+;NM_138714:+;NM_173214:+;RightGenes=NM_001113178:+;NM_006599:+;NM_138713:+;NM_138714:+;NM_173214:+;XRef=;Frequency=0.00 chr16 CG SV 68281808 68282304 53 - . ID=1174;Type=tandem-duplication;Left=chr16:68281808-68282304;Right=chr16:68282435-68282978 chr16 CG SV 68282435 68282978 53 - . ID=1174;Type=tandem-duplication;Left=chr16:68281808-68282304;Right=chr16:68282435-68282978 chr17 CG SV 15162438 15162941 26 + . ID=5139;Type=complex;Left=chr17:15162438-15162941+;Right=chr22:27395459-27395912-;Distance=;DiscordantMatePairAlignments=26;LeftRepeat=;RightRepeat=;LeftGenes=NM_031898:-;RightGenes=NM_001145418:-;XRef=;Frequency=0.00 chr22 CG SV 27395459 27395912 26 + . ID=5139;Type=complex;Left=chr17:15162438-15162941+;Right=chr22:27395459-27395912-;Distance=;DiscordantMatePairAlignments=26;LeftRepeat=;RightRepeat=;LeftGenes=NM_031898:-;RightGenes=NM_001145418:-;XRef=;Frequency=0.00 chr17 CG SV 18070771 18090238 39 . . ID=5224;Type=probable-inversion;Left=chr17:18070771-18071407+;Right=chr17:18089644-18090238-;Distance=19467;DiscordantMatePairAlignments=39;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_004140:+;RightGenes=NM_002018:-;XRef=;Frequency=0.00 chr17 CG SV 18070771 18071407 39 + . ID=5224;Type=probable-inversion;Left=chr17:18070771-18071407;Right=chr17:18089644-18090238 chr17 CG SV 18089644 18090238 39 + . ID=5224;Type=probable-inversion;Left=chr17:18070771-18071407;Right=chr17:18089644-18090238 chr17 CG SV 25525595 25539027 87 . . ID=2724;Type=deletion;Left=chr17:25525595-25526223+;Right=chr17:25538316-25539027+;Distance=12721;DiscordantMatePairAlignments=87;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_032141:+;RightGenes=;XRef=;Frequency=0.00 chr17 CG SV 25525595 25526223 87 + . ID=2724;Type=deletion;Left=chr17:25525595-25526223;Right=chr17:25538316-25539027 chr17 CG SV 25538316 25539027 87 + . ID=2724;Type=deletion;Left=chr17:25525595-25526223;Right=chr17:25538316-25539027 chr17 CG SV 36849187 36849689 68 - . ID=1013;Type=interchromosomal;Left=chr17:36849187-36849689-;Right=chr22:39682031-39682618-;Distance=;DiscordantMatePairAlignments=68;LeftRepeat=Self chain;RightRepeat=AluS:SINE:Alu;LeftGenes=NM_006771:-;RightGenes=NM_014248:+;XRef=;Frequency=0.00 chr22 CG SV 39682031 39682618 68 - . ID=1013;Type=interchromosomal;Left=chr17:36849187-36849689-;Right=chr22:39682031-39682618-;Distance=;DiscordantMatePairAlignments=68;LeftRepeat=Self chain;RightRepeat=AluS:SINE:Alu;LeftGenes=NM_006771:-;RightGenes=NM_014248:+;XRef=;Frequency=0.00 chr17 CG SV 50234983 50235967 21 . . ID=2685;Type=deletion;Left=chr17:50234983-50235591+;Right=chr17:50235514-50235967+;Distance=531;DiscordantMatePairAlignments=21;LeftRepeat=Self chain;RightRepeat=L1MEb:LINE:L1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr17 CG SV 50234983 50235591 21 + . ID=2685;Type=deletion;Left=chr17:50234983-50235591;Right=chr17:50235514-50235967 chr17 CG SV 50235514 50235967 21 + . ID=2685;Type=deletion;Left=chr17:50234983-50235591;Right=chr17:50235514-50235967 chr17 CG SV 52380503 52600388 41 . . ID=1161;Type=tandem-duplication;Left=chr17:52380503-52380988-;Right=chr17:52599816-52600388-;Distance=219400;DiscordantMatePairAlignments=41;LeftRepeat=Self chain;RightRepeat=L1MC1:LINE:L1;LeftGenes=NM_004645:-;RightGenes=;XRef=;Frequency=0.00 chr17 CG SV 52380503 52380988 41 - . ID=1161;Type=tandem-duplication;Left=chr17:52380503-52380988;Right=chr17:52599816-52600388 chr17 CG SV 52599816 52600388 41 - . ID=1161;Type=tandem-duplication;Left=chr17:52380503-52380988;Right=chr17:52599816-52600388 chr17 CG SV 52384579 52388063 29 . . ID=2682;Type=deletion;Left=chr17:52384579-52384988+;Right=chr17:52387530-52388063+;Distance=2951;DiscordantMatePairAlignments=29;LeftRepeat=SegDup;Self chain;RightRepeat=AluSx:SINE:Alu;SegDup;Self chain;LeftGenes=NM_004645:-;RightGenes=NM_004645:-;XRef=;Frequency=0.00 chr17 CG SV 52384579 52384988 29 + . ID=2682;Type=deletion;Left=chr17:52384579-52384988;Right=chr17:52387530-52388063 chr17 CG SV 52387530 52388063 29 + . ID=2682;Type=deletion;Left=chr17:52384579-52384988;Right=chr17:52387530-52388063 chr17 CG SV 77834977 77835703 16 . . ID=1156;Type=tandem-duplication;Left=chr17:77834977-77835344-;Right=chr17:77835317-77835703-;Distance=359;DiscordantMatePairAlignments=16;LeftRepeat=AluY:SINE:Alu;Self chain;RightRepeat=AluSp:SINE:Alu;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr17 CG SV 77834977 77835344 16 - . ID=1156;Type=tandem-duplication;Left=chr17:77834977-77835344;Right=chr17:77835317-77835703 chr17 CG SV 77835317 77835703 16 - . ID=1156;Type=tandem-duplication;Left=chr17:77834977-77835344;Right=chr17:77835317-77835703 chr18 CG SV 60936130 60991253 43 . . ID=1092;Type=tandem-duplication;Left=chr18:60936130-60936679-;Right=chr18:60990797-60991253-;Distance=54574;DiscordantMatePairAlignments=43;LeftRepeat=L2:LINE:L2;RightRepeat=L1PB1:LINE:L1;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr18 CG SV 60936130 60936679 43 - . ID=1092;Type=tandem-duplication;Left=chr18:60936130-60936679;Right=chr18:60990797-60991253 chr18 CG SV 60990797 60991253 43 - . ID=1092;Type=tandem-duplication;Left=chr18:60936130-60936679;Right=chr18:60990797-60991253 chr19 CG SV 8404114 8432308 18 . . ID=2545;Type=deletion;Left=chr19:8404114-8404555+;Right=chr19:8431839-8432308+;Distance=27725;DiscordantMatePairAlignments=18;LeftRepeat=AluJb:SINE:Alu;Self chain;RightRepeat=Self chain;LeftGenes=NM_001005415:+;NM_001005416:+;NM_016496:+;RightGenes=NM_005968:+;NM_031203:+;XRef=;Frequency=0.00 chr19 CG SV 8404114 8404555 18 + . ID=2545;Type=deletion;Left=chr19:8404114-8404555;Right=chr19:8431839-8432308 chr19 CG SV 8431839 8432308 18 + . ID=2545;Type=deletion;Left=chr19:8404114-8404555;Right=chr19:8431839-8432308 chr19 CG SV 16434073 16560179 103 . . ID=5179;Type=probable-inversion;Left=chr19:16434073-16434667+;Right=chr19:16559679-16560179-;Distance=126106;DiscordantMatePairAlignments=103;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_021235:-;RightGenes=NM_004831:-;XRef=;Frequency=0.00 chr19 CG SV 16434073 16434667 103 + . ID=5179;Type=probable-inversion;Left=chr19:16434073-16434667;Right=chr19:16559679-16560179 chr19 CG SV 16559679 16560179 103 + . ID=5179;Type=probable-inversion;Left=chr19:16434073-16434667;Right=chr19:16559679-16560179 chr19 CG SV 34868629 35397720 23 . . ID=1055;Type=tandem-duplication;Left=chr19:34868629-34869318-;Right=chr19:35397356-35397720-;Distance=528402;DiscordantMatePairAlignments=23;LeftRepeat=L2:LINE:L2;Self chain;RightRepeat=Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr19 CG SV 34868629 34869318 23 - . ID=1055;Type=tandem-duplication;Left=chr19:34868629-34869318;Right=chr19:35397356-35397720 chr19 CG SV 35397356 35397720 23 - . ID=1055;Type=tandem-duplication;Left=chr19:34868629-34869318;Right=chr19:35397356-35397720 chr20 CG SV 9115210 9237389 113 . . ID=2459;Type=deletion;Left=chr20:9115210-9115752+;Right=chr20:9236871-9237389+;Distance=121661;DiscordantMatePairAlignments=113;LeftRepeat=;RightRepeat=;LeftGenes=NM_000933:+;NM_182797:+;RightGenes=NM_000933:+;NM_182797:+;XRef=;Frequency=0.00 chr20 CG SV 9115210 9115752 113 + . ID=2459;Type=deletion;Left=chr20:9115210-9115752;Right=chr20:9236871-9237389 chr20 CG SV 9236871 9237389 113 + . ID=2459;Type=deletion;Left=chr20:9115210-9115752;Right=chr20:9236871-9237389 chr20 CG SV 14651687 14908891 67 . . ID=2455;Type=deletion;Left=chr20:14651687-14652228+;Right=chr20:14908280-14908891+;Distance=256593;DiscordantMatePairAlignments=67;LeftRepeat=;RightRepeat=;LeftGenes=NM_080676:+;RightGenes=NM_080676:+;XRef=;Frequency=0.00 chr20 CG SV 14651687 14652228 67 + . ID=2455;Type=deletion;Left=chr20:14651687-14652228;Right=chr20:14908280-14908891 chr20 CG SV 14908280 14908891 67 + . ID=2455;Type=deletion;Left=chr20:14651687-14652228;Right=chr20:14908280-14908891 chr20 CG SV 14696547 14848496 14 . . ID=2453;Type=deletion;Left=chr20:14696547-14697039+;Right=chr20:14848129-14848496+;Distance=151582;DiscordantMatePairAlignments=14;LeftRepeat=L1PA7:LINE:L1;Self chain;RightRepeat=;LeftGenes=NM_080676:+;RightGenes=NM_080676:+;XRef=;Frequency=0.00 chr20 CG SV 14696547 14697039 14 + . ID=2453;Type=deletion;Left=chr20:14696547-14697039;Right=chr20:14848129-14848496 chr20 CG SV 14848129 14848496 14 + . ID=2453;Type=deletion;Left=chr20:14696547-14697039;Right=chr20:14848129-14848496 chr20 CG SV 14714542 14722346 90 . . ID=2454;Type=deletion;Left=chr20:14714542-14715144+;Right=chr20:14721636-14722346+;Distance=7094;DiscordantMatePairAlignments=90;LeftRepeat=MLT1J:LTR:MaLR;RightRepeat=L2:LINE:L2;LeftGenes=NM_080676:+;RightGenes=NM_080676:+;XRef=;Frequency=0.00 chr20 CG SV 14714542 14715144 90 + . ID=2454;Type=deletion;Left=chr20:14714542-14715144;Right=chr20:14721636-14722346 chr20 CG SV 14721636 14722346 90 + . ID=2454;Type=deletion;Left=chr20:14714542-14715144;Right=chr20:14721636-14722346 chr20 CG SV 15007016 15071077 71 . . ID=2451;Type=deletion;Left=chr20:15007016-15007501+;Right=chr20:15070396-15071077+;Distance=63380;DiscordantMatePairAlignments=71;LeftRepeat=;RightRepeat=;LeftGenes=NM_080676:+;RightGenes=NM_080676:+;XRef=;Frequency=0.00 chr20 CG SV 15007016 15007501 71 + . ID=2451;Type=deletion;Left=chr20:15007016-15007501;Right=chr20:15070396-15071077 chr20 CG SV 15070396 15071077 71 + . ID=2451;Type=deletion;Left=chr20:15007016-15007501;Right=chr20:15070396-15071077 chr20 CG SV 15247611 15302168 46 . . ID=2448;Type=deletion;Left=chr20:15247611-15248199+;Right=chr20:15301668-15302168+;Distance=54057;DiscordantMatePairAlignments=46;LeftRepeat=L1MB5:LINE:L1;RightRepeat=AluJo:SINE:Alu;LeftGenes=NM_001033087:+;NM_080676:+;RightGenes=NM_001033087:+;NM_080676:+;XRef=;Frequency=0.00 chr20 CG SV 15247611 15248199 46 + . ID=2448;Type=deletion;Left=chr20:15247611-15248199;Right=chr20:15301668-15302168 chr20 CG SV 15301668 15302168 46 + . ID=2448;Type=deletion;Left=chr20:15247611-15248199;Right=chr20:15301668-15302168 chr20 CG SV 15735950 15883876 70 . . ID=2446;Type=deletion;Left=chr20:15735950-15736496+;Right=chr20:15883357-15883876+;Distance=147407;DiscordantMatePairAlignments=70;LeftRepeat=;RightRepeat=L2:LINE:L2;LeftGenes=NM_001033087:+;NM_080676:+;RightGenes=NM_001033087:+;NM_080676:+;XRef=;Frequency=0.00 chr20 CG SV 15735950 15736496 70 + . ID=2446;Type=deletion;Left=chr20:15735950-15736496;Right=chr20:15883357-15883876 chr20 CG SV 15883357 15883876 70 + . ID=2446;Type=deletion;Left=chr20:15735950-15736496;Right=chr20:15883357-15883876 chr21 CG SV 24821509 24857396 31 . . ID=2352;Type=deletion;Left=chr21:24821509-24822116+;Right=chr21:24857083-24857396+;Distance=35574;DiscordantMatePairAlignments=31;LeftRepeat=AluY:SINE:Alu;RightRepeat=;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chr21 CG SV 24821509 24822116 31 + . ID=2352;Type=deletion;Left=chr21:24821509-24822116;Right=chr21:24857083-24857396 chr21 CG SV 24857083 24857396 31 + . ID=2352;Type=deletion;Left=chr21:24821509-24822116;Right=chr21:24857083-24857396 chr22 CG SV 48809296 48810445 27 . . ID=2280;Type=deletion;Left=chr22:48809296-48809894+;Right=chr22:48809992-48810445+;Distance=696;DiscordantMatePairAlignments=27;LeftRepeat=Self chain;Tandem period 22;Tandem period 43;RightRepeat=Self chain;Tandem period 22;Tandem period 43;LeftGenes=NM_001080447:-;RightGenes=NM_001080447:-;XRef=;Frequency=0.06 chr22 CG SV 48809296 48809894 27 + . ID=2280;Type=deletion;Left=chr22:48809296-48809894;Right=chr22:48809992-48810445 chr22 CG SV 48809992 48810445 27 + . ID=2280;Type=deletion;Left=chr22:48809296-48809894;Right=chr22:48809992-48810445 chrX CG SV 1411270 1413917 14 . . ID=2273;Type=deletion;Left=chrX:1411270-1411464+;Right=chrX:1413443-1413917+;Distance=2173;DiscordantMatePairAlignments=14;LeftRepeat=L1PA7:LINE:L1;SegDup;Self chain;RightRepeat=AluSg/x:SINE:Alu;SegDup;Self chain;Tandem A;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chrX CG SV 1411270 1411464 14 + . ID=2273;Type=deletion;Left=chrX:1411270-1411464;Right=chrX:1413443-1413917 chrX CG SV 1413443 1413917 14 + . ID=2273;Type=deletion;Left=chrX:1411270-1411464;Right=chrX:1413443-1413917 chrX CG SV 7019265 7109258 103 . . ID=2264;Type=deletion;Left=chrX:7019265-7019778+;Right=chrX:7108602-7109258+;Distance=89337;DiscordantMatePairAlignments=103;LeftRepeat=Self chain;RightRepeat=MER1A:DNA:MER1_type;Self chain;LeftGenes=NM_001135565:-;NM_012080:-;RightGenes=;XRef=;Frequency=0.00 chrX CG SV 7019265 7019778 103 + . ID=2264;Type=deletion;Left=chrX:7019265-7019778;Right=chrX:7108602-7109258 chrX CG SV 7108602 7109258 103 + . ID=2264;Type=deletion;Left=chrX:7019265-7019778;Right=chrX:7108602-7109258 chrX CG SV 7226561 7274944 68 . . ID=2262;Type=deletion;Left=chrX:7226561-7227208+;Right=chrX:7274436-7274944+;Distance=47875;DiscordantMatePairAlignments=68;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NM_000351:+;RightGenes=NM_000351:+;XRef=;Frequency=0.00 chrX CG SV 7226561 7227208 68 + . ID=2262;Type=deletion;Left=chrX:7226561-7227208;Right=chrX:7274436-7274944 chrX CG SV 7274436 7274944 68 + . ID=2262;Type=deletion;Left=chrX:7226561-7227208;Right=chrX:7274436-7274944 chrX CG SV 26074161 40220013 80 . . ID=5131;Type=complex;Left=chrX:26074161-26074827+;Right=chrX:40219389-40220013-;Distance=14145852;DiscordantMatePairAlignments=80;LeftRepeat=Self chain;RightRepeat=LTR16A:LTR:ERVL;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chrX CG SV 26074161 26074827 80 + . ID=5131;Type=complex;Left=chrX:26074161-26074827;Right=chrX:40219389-40220013 chrX CG SV 40219389 40220013 80 + . ID=5131;Type=complex;Left=chrX:26074161-26074827;Right=chrX:40219389-40220013 chrX CG SV 26073591 40220662 87 . . ID=36;Type=complex;Left=chrX:26073591-26074169-;Right=chrX:40220026-40220662+;Distance=14145857;DiscordantMatePairAlignments=87;LeftRepeat=Self chain;RightRepeat=LTR16A:LTR:ERVL;Self chain;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chrX CG SV 26073591 26074169 87 - . ID=36;Type=complex;Left=chrX:26073591-26074169;Right=chrX:40220026-40220662 chrX CG SV 40220026 40220662 87 - . ID=36;Type=complex;Left=chrX:26073591-26074169;Right=chrX:40220026-40220662 chrX CG SV 73415868 73516231 136 . . ID=975;Type=tandem-duplication;Left=chrX:73415868-73416421-;Right=chrX:73515703-73516231-;Distance=99810;DiscordantMatePairAlignments=136;LeftRepeat=Self chain;RightRepeat=Self chain;LeftGenes=NR_028379:-;RightGenes=;XRef=;Frequency=0.00 chrX CG SV 73415868 73416421 136 - . ID=975;Type=tandem-duplication;Left=chrX:73415868-73416421;Right=chrX:73515703-73516231 chrX CG SV 73515703 73516231 136 - . ID=975;Type=tandem-duplication;Left=chrX:73415868-73416421;Right=chrX:73515703-73516231 chrX CG SV 96576197 96699762 56 . . ID=2211;Type=deletion;Left=chrX:96576197-96576775+;Right=chrX:96699308-96699762+;Distance=123111;DiscordantMatePairAlignments=56;LeftRepeat=AluSc:SINE:Alu;RightRepeat=;LeftGenes=NM_006729:+;NM_007309:+;RightGenes=NM_006729:+;XRef=;Frequency=0.00 chrX CG SV 96576197 96576775 56 + . ID=2211;Type=deletion;Left=chrX:96576197-96576775;Right=chrX:96699308-96699762 chrX CG SV 96699308 96699762 56 + . ID=2211;Type=deletion;Left=chrX:96576197-96576775;Right=chrX:96699308-96699762 chrX CG SV 117905654 117908520 101 . . ID=2205;Type=deletion;Left=chrX:117905654-117906320+;Right=chrX:117907917-117908520+;Distance=2263;DiscordantMatePairAlignments=101;LeftRepeat=HERVP71A:LTR:ERV1;RightRepeat=AluY:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chrX CG SV 117905654 117906320 101 + . ID=2205;Type=deletion;Left=chrX:117905654-117906320;Right=chrX:117907917-117908520 chrX CG SV 117907917 117908520 101 + . ID=2205;Type=deletion;Left=chrX:117905654-117906320;Right=chrX:117907917-117908520 chrX CG SV 122896658 122898095 14 . . ID=2201;Type=deletion;Left=chrX:122896658-122896803+;Right=chrX:122897659-122898095+;Distance=1001;DiscordantMatePairAlignments=14;LeftRepeat=CT-rich:Low_complexity:Low_complexity;RightRepeat=AluSg:SINE:Alu;LeftGenes=;RightGenes=;XRef=;Frequency=0.00 chrX CG SV 122896658 122896803 14 + . ID=2201;Type=deletion;Left=chrX:122896658-122896803;Right=chrX:122897659-122898095 chrX CG SV 122897659 122898095 14 + . ID=2201;Type=deletion;Left=chrX:122896658-122896803;Right=chrX:122897659-122898095